RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 ATP5C1P36542 298 aaKnown RBP8.01□□□□□ -1.13
GNE-205ENST00000539815 GRK6P43250 576 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 NLRP12P59046 1061 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 ZBED6P86452 979 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 RING1Q06587 406 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 LY6G5CQ5SRR4 150 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 LRRC31Q6UY01 552 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 DRAXINQ8NBI3 349 aaPredicted RBP8.01□□□□□ -1.13
GNE-205ENST00000539815 USP33Q8TEY7 942 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 LARP4BQ92615 738 aaKnown RBP8.01□□□□□ -1.13
GNE-205ENST00000539815 HPS3Q969F9 1004 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 SAAL1Q96ER3 474 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 CYP2S1Q96SQ9 504 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 DUSP9Q99956 384 aaKnown RBP8.01□□□□□ -1.13
GNE-205ENST00000539815 SPATS2LQ9NUQ6 558 aaKnown RBP8.01□□□□□ -1.13
GNE-205ENST00000539815 SPTLC3Q9NUV7 552 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 DLGAP2Q9P1A6 1054 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 TBX20Q9UMR3 447 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 MSRB2Q9Y3D2 182 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 SZT2Q5T011 3432 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 ABCA7Q8IZY2 2146 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 BAHCC1Q9P281 2608 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 BCAT2O15382 392 aaPredicted RBP8.01□□□□□ -1.13
GNE-205ENST00000539815 MAOBP27338 520 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 ZNF445P59923 1031 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 TAF10Q12962 218 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 C9orf57Q5W0N0 161 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 FBXO38Q6PIJ6 1188 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 SCARA5Q6ZMJ2 495 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 NYAP1Q6ZVC0 841 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 TMEM110Q86TL2 294 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 FMNL3Q8IVF7 1028 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 TTC30BQ8N4P2 665 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 ZSCAN1Q8NBB4 408 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 GLIS3Q8NEA6 775 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 FUBP3Q96I24 572 aaKnown RBP eCLIP8.01□□□□□ -1.13
GNE-205ENST00000539815 CCDC114Q96M63 670 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 CGRRF1Q99675 332 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 LLPHQ9BRT6 129 aaKnown RBP8.01□□□□□ -1.13
GNE-205ENST00000539815 C2CD2Q9Y426 696 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 PARP14Q460N5 1801 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 COL6A3P12111 3177 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 F8VP50 259 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 KIAA0391O15091 583 aaKnown RBP8.01□□□□□ -1.13
GNE-205ENST00000539815 NCAM1P13591 858 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 ITPKAP23677 461 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 PMLP29590 882 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 ACTN2P35609 894 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 TNFSF9P41273 254 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 SLC10A6Q3KNW5 377 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 MDH1BQ5I0G3 518 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 PMS2CLQ68D20 193 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 TRIM42Q8IWZ5 723 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 SIX6OS1Q8N1H7 587 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 ZNF557Q8N988 423 aaPredicted RBP8.01□□□□□ -1.13
GNE-205ENST00000539815 FBXO18Q8NFZ0 1043 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 N4BP2L2Q92802 583 aaPredicted RBP8.01□□□□□ -1.13
GNE-205ENST00000539815 TMEM60Q9H2L4 133 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 SEL1LQ9UBV2 794 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 CDH9Q9ULB4 789 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 PCDHB11Q9Y5F2 797 aa8.01□□□□□ -1.13
GNE-205ENST00000539815 FRMD3A2A2Y4 597 aa8□□□□□ -1.13
GNE-205ENST00000539815 FLRT2O43155 660 aa8□□□□□ -1.13
GNE-205ENST00000539815 SNUPNO95149 360 aaKnown RBP8□□□□□ -1.13
GNE-205ENST00000539815 BCAT1P54687 386 aa8□□□□□ -1.13
GNE-205ENST00000539815 FCHO2Q0JRZ9 810 aa8□□□□□ -1.13
GNE-205ENST00000539815 STAT4Q14765 748 aa8□□□□□ -1.13
GNE-205ENST00000539815 DHCR24Q15392 516 aa8□□□□□ -1.13
GNE-205ENST00000539815 COL28A1Q2UY09 1125 aa8□□□□□ -1.13
GNE-205ENST00000539815 ZNF699Q32M78 642 aa8□□□□□ -1.13
GNE-205ENST00000539815 CFAP58Q5T655 872 aa8□□□□□ -1.13
GNE-205ENST00000539815 SPATA1Q5VX52 437 aa8□□□□□ -1.13
GNE-205ENST00000539815 PRPF39Q86UA1 669 aaKnown RBP8□□□□□ -1.13
GNE-205ENST00000539815 ZNF397Q8NF99 534 aaPredicted RBP8□□□□□ -1.13
GNE-205ENST00000539815 PLEKHG4BQ96PX9 1271 aa8□□□□□ -1.13
GNE-205ENST00000539815 MMTAG2Q9BU76 263 aaKnown RBP8□□□□□ -1.13
GNE-205ENST00000539815 GDF3Q9NR23 364 aa8□□□□□ -1.13
GNE-205ENST00000539815 SRRM3A6NNA2 597 aaPredicted RBP8□□□□□ -1.13
GNE-205ENST00000539815 FTH1P19P0C7X4 201 aa8□□□□□ -1.13
GNE-205ENST00000539815 HOXA6P31267 233 aa8□□□□□ -1.13
GNE-205ENST00000539815 PEX19P40855 299 aa8□□□□□ -1.13
GNE-205ENST00000539815 NTRK3Q16288 839 aa8□□□□□ -1.13
GNE-205ENST00000539815 GAREM2Q75VX8 874 aa8□□□□□ -1.13
GNE-205ENST00000539815 FILIP1Q7Z7B0 1213 aa8□□□□□ -1.13
GNE-205ENST00000539815 SLC39A7Q92504 469 aa8□□□□□ -1.13
GNE-205ENST00000539815 USP13Q92995 863 aaPredicted RBP8□□□□□ -1.13
GNE-205ENST00000539815 CDK5RAP1Q96SZ6 601 aaKnown RBP8□□□□□ -1.13
GNE-205ENST00000539815 ACBD6Q9BR61 282 aa8□□□□□ -1.13
GNE-205ENST00000539815 CNTN3Q9P232 1028 aa8□□□□□ -1.13
GNE-205ENST00000539815 ASCC3Q8N3C0 2202 aaKnown RBP8□□□□□ -1.13
GNE-205ENST00000539815 TANC1Q9C0D5 1861 aa8□□□□□ -1.13
GNE-205ENST00000539815 COL4A6Q14031 1691 aa8□□□□□ -1.13
GNE-205ENST00000539815 BRCA2P51587 3418 aa8□□□□□ -1.13
GNE-205ENST00000539815 TRABD2BA6NFA1 517 aa8□□□□□ -1.13
GNE-205ENST00000539815 LEFTY2O00292 366 aa8□□□□□ -1.13
GNE-205ENST00000539815 HLA-EP13747 358 aa8□□□□□ -1.13
GNE-205ENST00000539815 ADORA2BP29275 332 aa8□□□□□ -1.13
GNE-205ENST00000539815 YWHAEP62258 255 aaKnown RBP8□□□□□ -1.13
GNE-205ENST00000539815 MCM6Q14566 821 aa8□□□□□ -1.13
GNE-205ENST00000539815 INTS6LQ5JSJ4 861 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms