RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 A0A1W2PQH9 124 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 ANKRD34BA5PLL1 514 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 TMEM150BA6NC51 233 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 PATE3B3GLJ2 98 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 ADAMTS3O15072 1205 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 EXTL3O43909 919 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 HBP1O60381 514 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 LRP3O75074 770 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 NAT2P11245 290 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 DARSP14868 501 aaKnown RBP3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 CCNE1P24864 410 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 FPR2P25090 351 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 ACVRL1P37023 503 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 VIPR2P41587 438 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 OR1G1P47890 313 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 LIMK1P53667 647 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 FAM193AP78312 1265 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 FANCCQ00597 558 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 MTMR1Q13613 665 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 GIT2Q14161 759 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 SLC5A9Q2M3M2 681 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 UAP1L1Q3KQV9 507 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 ZNF484Q5JVG2 852 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 PRR31Q5SQ13 230 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 C20orf194Q5TEA3 1177 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 MROH9Q5TGP6 573 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 IQCEQ6IPM2 695 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 EFCAB12Q6NXP0 572 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 PKN3Q6P5Z2 889 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 TRMT10BQ6PF06 316 aaKnown RBP3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 VHLLQ6RSH7 139 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 ABHD15Q6UXT9 468 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 LONP2Q86WA8 852 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 NT5DC4Q86YG4 428 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 MARCH9Q86YJ5 346 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 RAB11FIP4Q86YS3 637 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 CCDC60Q8IWA6 550 aaPredicted RBP3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 KBTBD2Q8IY47 623 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 GIMAP8Q8ND71 665 aaPredicted RBP3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 BVESQ8NE79 360 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 OR6P1Q8NGX9 317 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 IGDCC4Q8TDY8 1250 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 FAM3CQ92520 227 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 ESR2Q92731 530 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 GPRASP2Q96D09 838 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 TCEAL4Q96EI5 215 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 TOE1Q96GM8 510 aaKnown RBP3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 DRC1Q96MC2 740 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 NELL2Q99435 816 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 HNRNPABQ99729 332 aaKnown RBP3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 PHF20Q9BVI0 1012 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 FAM126AQ9BYI3 521 aaPredicted RBP3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 RIOX1Q9H6W3 641 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 DCTPP1Q9H773 170 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 CCSER2Q9H7U1 834 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 BARX1Q9HBU1 254 aaPredicted RBP3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 CHST12Q9NRB3 414 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 KCNH7Q9NS40 1196 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 EFR3BQ9Y2G0 817 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 CACNA1EQ15878 2313 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 FRMPD4Q14CM0 1322 aa3.34□□□□□ -1.87
CHMP4A-208ENST00000534106 MYH4Q9Y623 1939 aa3.34□□□□□ -1.88
CHMP4A-208ENST00000534106 PTPN13Q12923 2485 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 MYH7BA7E2Y1 1941 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 NBPF19A0A087WUL8 3843 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 A0A087WZ62 844 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 IGKV6D-21A0A0A0MT36 114 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 EIF4E1BA6NMX2 242 aaKnown RBP3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 CDX4O14627 284 aaPredicted RBP3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 ZNF213O14771 459 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 NCAM2O15394 837 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 GPR42O15529 346 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 STAM2O75886 525 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 C1QL1O75973 258 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 EPN2O95208 641 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 SOD2P04179 222 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 URODP06132 367 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 ZNF28P17035 718 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 GJA1P17302 382 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 CEBPBP17676 345 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 FCARP24071 287 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 SLC6A11P48066 632 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 GLUD2P49448 558 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 SELENOPP49908 381 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 GPC3P51654 580 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 PFKPQ01813 784 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 DSG1Q02413 1049 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 SCAPQ12770 1279 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 ADAM9Q13443 819 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 GRM4Q14833 912 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 SEC23AQ15436 765 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 CDSNQ15517 529 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 INF2Q27J81 1249 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 CR1LQ2VPA4 569 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 MCMDC2Q4G0Z9 681 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 HS1BP3Q53T59 392 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 FAM78AQ5JUQ0 283 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 ODR4Q5SWX8 454 aa3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 IFIT1BQ5T764 474 aaKnown RBP3.33□□□□□ -1.88
CHMP4A-208ENST00000534106 MBLAC2Q68D91 279 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms