RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 PAPLNO95428 1278 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 SEC24AO95486 1093 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 LRG1P02750 347 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 C4BPAP04003 597 aaKnown RBP6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 POU2F2P09086 479 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 EPB41P11171 864 aaKnown RBP6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 BMP6P22004 513 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 CALRP27797 417 aaKnown RBP6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 ATICP31939 592 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 LHX1P48742 406 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 PMS1P54277 932 aaKnown RBP6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 MYL6P60660 151 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 SUMO1P63165 101 aaKnown RBP6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 MYL7Q01449 175 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 TSPY1Q01534 308 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 ENPEPQ07075 957 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 SMARCB1Q12824 385 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 POU4F2Q12837 409 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 DUSP4Q13115 394 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 SOWAHAQ2M3V2 549 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 ZNF699Q32M78 642 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 WDR72Q3MJ13 1102 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 ZACNQ401N2 412 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 SLC39A12Q504Y0 691 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 TDRD10Q5VZ19 366 aaKnown RBP6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 KLHL10Q6JEL2 608 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 TOGARAM2Q6ZUX3 1019 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 SV2AQ7L0J3 742 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 OTOP3Q7RTS5 596 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 GRASPQ7Z6J2 395 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 DCP1BQ8IZD4 617 aaKnown RBP6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 ADGRF2Q8IZF7 708 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 CNTD1Q8N815 330 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 CCDC89Q8N998 374 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 TRIML1Q8N9V2 468 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 SPATA18Q8TC71 538 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 SYAP1Q96A49 352 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 ACSF2Q96CM8 615 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 EXOC2Q96KP1 924 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 TMEM209Q96SK2 561 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 MMS19Q96T76 1030 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 RTP3Q9BQQ7 232 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 ACBD6Q9BR61 282 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 MENTQ9BUN1 341 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 ZCWPW1Q9H0M4 648 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 SNX25Q9H3E2 840 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 CLSTN2Q9H4D0 955 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 IFT22Q9H7X7 185 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 PLCB1Q9NQ66 1216 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 LMBRD1Q9NUN5 540 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 DDX43Q9NXZ2 648 aaKnown RBP6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 NXF1Q9UBU9 619 aaKnown RBP6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 IP6K2Q9UHH9 426 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 SALL4Q9UJQ4 1053 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 L1RE1Q9UN81 338 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 APOBEC2Q9Y235 224 aaKnown RBP6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 ANKRD6Q9Y2G4 727 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 PCDHB5Q9Y5E4 795 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 INSL5Q9Y5Q6 135 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 CLUHO75153 1309 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 UNC80Q8N2C7 3258 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 BICDL2A1A5D9 508 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 MTMR11A4FU01 709 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 TRIM49BA6NDI0 452 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 C2CD4DB7Z1M9 353 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 GABRDO14764 452 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 SLC16A3O15427 465 aaKnown RBP6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 FAM163BP0C2L3 166 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 TRIM49P0CI25 452 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 TRIM49CP0CI26 452 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 P4HA1P13674 534 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 ALADP13716 330 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 PTPN2P17706 415 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 CCND1P24385 295 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 ACAT1P24752 427 aaKnown RBP6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 CCNE1P24864 410 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 PCSK1P29120 753 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 GTF2H1P32780 548 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 PIK3CAP42336 1068 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 HALP42357 657 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 ALDH1A3P47895 512 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 GCLMP48507 274 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 TUFMP49411 452 aaKnown RBP6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 CDR1P51861 262 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 ZNF143P52747 638 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 EPHB3P54753 998 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 NTHL1P78549 312 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 TMPRSS15P98073 1019 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 RPL6Q02878 288 aaKnown RBP6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 PPP3CAQ08209 521 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 TWF1Q12792 350 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 PLD1Q13393 1074 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 GTF2H3Q13889 308 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 GBX1Q14549 363 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 SGSM1Q2NKQ1 1148 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 MGAT5BQ3V5L5 792 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 PABPC1LQ4VXU2 614 aaKnown RBP6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 DCAF17Q5H9S7 520 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 ZNF667Q5HYK9 610 aa6.15□□□□□ -1.42
HMGB1P42-201ENST00000532126 C1orf220Q5T0J3 134 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms