RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 MESP2Q0VG99 397 aa18.92■□□□□ 0.62
PTPN11-204ENST00000531326 C2orf27AQ580R0 203 aa18.92■□□□□ 0.62
PTPN11-204ENST00000531326 ZNF667Q5HYK9 610 aa18.92■□□□□ 0.62
PTPN11-204ENST00000531326 N4BP2L1Q5TBK1 243 aaPredicted RBP18.92■□□□□ 0.62
PTPN11-204ENST00000531326 ADGRG2Q8IZP9 1017 aa18.92■□□□□ 0.62
PTPN11-204ENST00000531326 OR6B3Q8NGW1 331 aa18.92■□□□□ 0.62
PTPN11-204ENST00000531326 SNX25Q9H3E2 840 aa18.92■□□□□ 0.62
PTPN11-204ENST00000531326 NXF1Q9UBU9 619 aaKnown RBP18.92■□□□□ 0.62
PTPN11-204ENST00000531326 INVSQ9Y283 1065 aa18.92■□□□□ 0.62
PTPN11-204ENST00000531326 CPQQ9Y646 472 aa18.92■□□□□ 0.62
PTPN11-204ENST00000531326 MYOFQ9NZM1 2061 aa18.92■□□□□ 0.62
PTPN11-204ENST00000531326 SMTNL1A8MU46 457 aa18.91■□□□□ 0.62
PTPN11-204ENST00000531326 CLDN5O00501 218 aa18.91■□□□□ 0.62
PTPN11-204ENST00000531326 SCAMP3O14828 347 aaKnown RBP18.91■□□□□ 0.62
PTPN11-204ENST00000531326 CAVIN2O95810 425 aa18.91■□□□□ 0.62
PTPN11-204ENST00000531326 CHRM1P11229 460 aaPredicted RBP18.91■□□□□ 0.62
PTPN11-204ENST00000531326 PTPN1P18031 435 aaKnown RBP18.91■□□□□ 0.62
PTPN11-204ENST00000531326 TNNC1P63316 161 aa18.91■□□□□ 0.62
PTPN11-204ENST00000531326 TAF10Q12962 218 aa18.91■□□□□ 0.62
PTPN11-204ENST00000531326 KRT31Q15323 416 aa18.91■□□□□ 0.62
PTPN11-204ENST00000531326 ELF2Q15723 593 aa18.91■□□□□ 0.62
PTPN11-204ENST00000531326 SFTPA1Q8IWL2 248 aa18.91■□□□□ 0.62
PTPN11-204ENST00000531326 TSTD1Q8NFU3 115 aa18.91■□□□□ 0.62
PTPN11-204ENST00000531326 LMO3Q8TAP4 145 aa18.91■□□□□ 0.62
PTPN11-204ENST00000531326 TPSD1Q9BZJ3 242 aa18.91■□□□□ 0.62
PTPN11-204ENST00000531326 ZNF518BQ9C0D4 1074 aa18.91■□□□□ 0.62
PTPN11-204ENST00000531326 SDCBP2Q9H190 292 aa18.91■□□□□ 0.62
PTPN11-204ENST00000531326 SMPD4Q9NXE4 827 aa18.91■□□□□ 0.62
PTPN11-204ENST00000531326 TAB2Q9NYJ8 693 aa18.91■□□□□ 0.62
PTPN11-204ENST00000531326 THADAQ6YHU6 1953 aa18.9■□□□□ 0.62
PTPN11-204ENST00000531326 ZFHX4Q86UP3 3567 aa18.9■□□□□ 0.62
PTPN11-204ENST00000531326 BCLAF3A2AJT9 711 aaKnown RBP18.9■□□□□ 0.62
PTPN11-204ENST00000531326 RHOBTB1O94844 696 aa18.9■□□□□ 0.62
PTPN11-204ENST00000531326 FAM163BP0C2L3 166 aa18.9■□□□□ 0.62
PTPN11-204ENST00000531326 PRKCSHP14314 528 aaPredicted RBP18.9■□□□□ 0.62
PTPN11-204ENST00000531326 HNRNPLP14866 589 aaKnown RBP eCLIP18.9■□□□□ 0.62
PTPN11-204ENST00000531326 PMLP29590 882 aa18.9■□□□□ 0.62
PTPN11-204ENST00000531326 ASPAP45381 313 aa18.9■□□□□ 0.62
PTPN11-204ENST00000531326 PPP3CCP48454 512 aa18.9■□□□□ 0.62
PTPN11-204ENST00000531326 CREB5Q02930 508 aa18.9■□□□□ 0.62
PTPN11-204ENST00000531326 DHCR24Q15392 516 aa18.9■□□□□ 0.62
PTPN11-204ENST00000531326 VWA3BQ502W6 1294 aa18.9■□□□□ 0.62
PTPN11-204ENST00000531326 APTXQ7Z2E3 356 aaKnown RBP18.9■□□□□ 0.62
PTPN11-204ENST00000531326 LUZP1Q86V48 1076 aa18.9■□□□□ 0.62
PTPN11-204ENST00000531326 RASSF3Q86WH2 238 aa18.9■□□□□ 0.62
PTPN11-204ENST00000531326 LSM14BQ9BX40 385 aaKnown RBP18.9■□□□□ 0.62
PTPN11-204ENST00000531326 B3GNT5Q9BYG0 378 aa18.9■□□□□ 0.62
PTPN11-204ENST00000531326 IMPG2Q9BZV3 1241 aa18.9■□□□□ 0.62
PTPN11-204ENST00000531326 TSPY26PQ9H489 355 aa18.9■□□□□ 0.62
PTPN11-204ENST00000531326 SMYD3Q9H7B4 428 aa18.9■□□□□ 0.62
PTPN11-204ENST00000531326 EHD2Q9NZN4 543 aa18.9■□□□□ 0.62
PTPN11-204ENST00000531326 LIMA1Q9UHB6 759 aaKnown RBP18.9■□□□□ 0.62
PTPN11-204ENST00000531326 MMP17Q9ULZ9 603 aa18.9■□□□□ 0.62
PTPN11-204ENST00000531326 ABL1P00519 1130 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 ATP1A3P13637 1013 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 GBP1P32455 592 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 SLC6A11P48066 632 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 ST3GAL2Q16842 350 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 PMS2CLQ68D20 193 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 RNF43Q68DV7 783 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 ANO7Q6IWH7 933 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 SCARA5Q6ZMJ2 495 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 C12orf40Q86WS4 652 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 CCDC33Q8N5R6 958 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 KIAA1958Q8N8K9 716 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 B3GALNT2Q8NCR0 500 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 EHBP1Q8NDI1 1231 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 CCDC26Q8TAB7 109 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 TATDN2Q93075 761 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 ELOVL4Q9GZR5 314 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 NIF3L1Q9GZT8 377 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 NDST4Q9H3R1 872 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 CFAP97Q9P2B7 532 aa18.89■□□□□ 0.61
PTPN11-204ENST00000531326 USP24Q9UPU5 2620 aa18.88■□□□□ 0.61
PTPN11-204ENST00000531326 BECN2A8MW95 431 aa18.88■□□□□ 0.61
PTPN11-204ENST00000531326 A8MXQ7 604 aa18.88■□□□□ 0.61
PTPN11-204ENST00000531326 CLSTN1O94985 981 aa18.88■□□□□ 0.61
PTPN11-204ENST00000531326 P4HA1P13674 534 aa18.88■□□□□ 0.61
PTPN11-204ENST00000531326 BCKDHBP21953 392 aa18.88■□□□□ 0.61
PTPN11-204ENST00000531326 CDH8P55286 799 aa18.88■□□□□ 0.61
PTPN11-204ENST00000531326 CETN1Q12798 172 aa18.88■□□□□ 0.61
PTPN11-204ENST00000531326 IFRD2Q12894 506 aaPredicted RBP18.88■□□□□ 0.61
PTPN11-204ENST00000531326 CRY1Q16526 586 aa18.88■□□□□ 0.61
PTPN11-204ENST00000531326 RHBDF2Q6PJF5 856 aa18.88■□□□□ 0.61
PTPN11-204ENST00000531326 TMEM92Q6UXU6 159 aa18.88■□□□□ 0.61
PTPN11-204ENST00000531326 CCDC150Q8NCX0 1101 aa18.88■□□□□ 0.61
PTPN11-204ENST00000531326 MDGA1Q8NFP4 955 aa18.88■□□□□ 0.61
PTPN11-204ENST00000531326 SLITRK1Q96PX8 696 aa18.88■□□□□ 0.61
PTPN11-204ENST00000531326 EDEM2Q9BV94 578 aa18.88■□□□□ 0.61
PTPN11-204ENST00000531326 INTS2Q9H0H0 1204 aaKnown RBP18.88■□□□□ 0.61
PTPN11-204ENST00000531326 GTPBP10A4D1E9 387 aaKnown RBP18.87■□□□□ 0.61
PTPN11-204ENST00000531326 LRRC10BA6NIK2 292 aa18.87■□□□□ 0.61
PTPN11-204ENST00000531326 KCNK5O95279 499 aa18.87■□□□□ 0.61
PTPN11-204ENST00000531326 COPB1P53618 953 aaKnown RBP18.87■□□□□ 0.61
PTPN11-204ENST00000531326 MRPS21P82921 87 aaKnown RBP18.87■□□□□ 0.61
PTPN11-204ENST00000531326 USP39Q53GS9 565 aaKnown RBP18.87■□□□□ 0.61
PTPN11-204ENST00000531326 PAQR9Q6ZVX9 377 aa18.87■□□□□ 0.61
PTPN11-204ENST00000531326 NUP93Q8N1F7 819 aa18.87■□□□□ 0.61
PTPN11-204ENST00000531326 IL17RCQ8NAC3 791 aa18.87■□□□□ 0.61
PTPN11-204ENST00000531326 FAXDC2Q96IV6 333 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms