RNA–Protein interactions for RNA: ENST00000512925.1

PFDN1-205, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 900 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-205ENST00000512925 PDE11AQ9HCR9 933 aa11.05□□□□□ -0.64
PFDN1-205ENST00000512925 SPHK2Q9NRA0 654 aa11.05□□□□□ -0.64
PFDN1-205ENST00000512925 RBAKQ9NYW8 714 aaPredicted RBP11.05□□□□□ -0.64
PFDN1-205ENST00000512925 EHD2Q9NZN4 543 aa11.05□□□□□ -0.64
PFDN1-205ENST00000512925 RAD54BQ9Y620 910 aa11.05□□□□□ -0.64
PFDN1-205ENST00000512925 PTPRBP23467 1997 aa11.05□□□□□ -0.64
PFDN1-205ENST00000512925 A0A1B0GTW7 788 aa11.04□□□□□ -0.64
PFDN1-205ENST00000512925 WASH3PC4AMC7 463 aa11.04□□□□□ -0.64
PFDN1-205ENST00000512925 GREM1O60565 184 aa11.04□□□□□ -0.64
PFDN1-205ENST00000512925 TBCAO75347 108 aaKnown RBP11.04□□□□□ -0.64
PFDN1-205ENST00000512925 KRT18P05783 430 aaKnown RBP11.04□□□□□ -0.64
PFDN1-205ENST00000512925 ZNF883P0CG24 379 aa11.04□□□□□ -0.64
PFDN1-205ENST00000512925 WARSP23381 471 aaKnown RBP11.04□□□□□ -0.64
PFDN1-205ENST00000512925 LSM11P83369 360 aaKnown RBP eCLIP11.04□□□□□ -0.64
PFDN1-205ENST00000512925 WDR45BQ5MNZ6 344 aa11.04□□□□□ -0.64
PFDN1-205ENST00000512925 SYCP2LQ5T4T6 812 aa11.04□□□□□ -0.64
PFDN1-205ENST00000512925 TDRD10Q5VZ19 366 aaKnown RBP11.04□□□□□ -0.64
PFDN1-205ENST00000512925 BTBD8Q5XKL5 378 aa11.04□□□□□ -0.64
PFDN1-205ENST00000512925 MCTP1Q6DN14 999 aa11.04□□□□□ -0.64
PFDN1-205ENST00000512925 SFR1Q86XK3 245 aa11.04□□□□□ -0.64
PFDN1-205ENST00000512925 CHPFQ8IZ52 775 aa11.04□□□□□ -0.64
PFDN1-205ENST00000512925 HVCN1Q96D96 273 aa11.04□□□□□ -0.64
PFDN1-205ENST00000512925 CALML4Q96GE6 196 aa11.04□□□□□ -0.64
PFDN1-205ENST00000512925 UBL7Q96S82 380 aaPredicted RBP11.04□□□□□ -0.64
PFDN1-205ENST00000512925 MTMR12Q9C0I1 747 aa11.04□□□□□ -0.64
PFDN1-205ENST00000512925 GAREM1Q9H706 876 aa11.04□□□□□ -0.64
PFDN1-205ENST00000512925 TM7SF3Q9NS93 570 aa11.04□□□□□ -0.64
PFDN1-205ENST00000512925 WSB2Q9NYS7 404 aaPredicted RBP11.04□□□□□ -0.64
PFDN1-205ENST00000512925 FNDC3AQ9Y2H6 1198 aaKnown RBP11.04□□□□□ -0.64
PFDN1-205ENST00000512925 NFE2L3Q9Y4A8 694 aa11.04□□□□□ -0.64
PFDN1-205ENST00000512925 PTPRJQ12913 1337 aa11.04□□□□□ -0.64
PFDN1-205ENST00000512925 ZNF462Q96JM2 2506 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 GOLGA8IPA6NC78 632 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 GOLGA8JA6NMD2 632 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 TK2O00142 265 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 NDUFS2O75306 463 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 CILPO75339 1184 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 LDHAP00338 332 aaKnown RBP11.03□□□□□ -0.64
PFDN1-205ENST00000512925 PDCP20941 246 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 CD6P30203 668 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 DDIT3P35638 169 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 UBA7P41226 1012 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 GRIN1Q05586 938 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 CUL4AQ13619 759 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 HLA-BQ31612 363 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 ANO4Q32M45 955 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 PREPLQ4J6C6 727 aaPredicted RBP11.03□□□□□ -0.64
PFDN1-205ENST00000512925 MDH1BQ5I0G3 518 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 SNX30Q5VWJ9 437 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 NUDT18Q6ZVK8 323 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 METTL3Q86U44 580 aaKnown RBP11.03□□□□□ -0.64
PFDN1-205ENST00000512925 ZCCHC9Q8N567 271 aaKnown RBP11.03□□□□□ -0.64
PFDN1-205ENST00000512925 OR5B17Q8NGF7 314 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 C1orf216Q8TAB5 229 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 LARP4BQ92615 738 aaKnown RBP11.03□□□□□ -0.64
PFDN1-205ENST00000512925 HPDLQ96IR7 371 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 SLITRK1Q96PX8 696 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 MRPL45Q9BRJ2 306 aaKnown RBP11.03□□□□□ -0.64
PFDN1-205ENST00000512925 CBWD1Q9BRT8 395 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 TRIM9Q9C026 710 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 ZNF518BQ9C0D4 1074 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 PRDM16Q9HAZ2 1276 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 ITM2CQ9NQX7 267 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 INTS13Q9NVM9 706 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 IL37Q9NZH6 218 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 CHORDC1Q9UHD1 332 aaPredicted RBP11.03□□□□□ -0.64
PFDN1-205ENST00000512925 BTBD3Q9Y2F9 522 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 PCDHGB2Q9Y5G2 931 aa11.03□□□□□ -0.64
PFDN1-205ENST00000512925 FAM149AA5PLN7 773 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 KCNJ18B7U540 433 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 ZBTB24O43167 697 aaPredicted RBP11.02□□□□□ -0.65
PFDN1-205ENST00000512925 CACNG3O60359 315 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 CISD3P0C7P0 127 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 ZDHHC11BP0C7U3 371 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 GARTP22102 1010 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 YWHAQP27348 245 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 IFRD2Q12894 506 aaPredicted RBP11.02□□□□□ -0.65
PFDN1-205ENST00000512925 MYO1EQ12965 1108 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 SMAD1Q15797 465 aaKnown RBP11.02□□□□□ -0.65
PFDN1-205ENST00000512925 HECTD3Q5T447 861 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 L1TD1Q5T7N2 865 aaKnown RBP11.02□□□□□ -0.65
PFDN1-205ENST00000512925 LARP1BQ659C4 914 aaKnown RBP11.02□□□□□ -0.65
PFDN1-205ENST00000512925 GRAMD4Q6IC98 578 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 SDE2Q6IQ49 451 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 HS2ST1Q7LGA3 356 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 NUP93Q8N1F7 819 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 ZNF454Q8N9F8 522 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 CADM4Q8NFZ8 388 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 RHBDD1Q8TEB9 315 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 OVCA2Q8WZ82 227 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 P2RY11Q96G91 374 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 TOE1Q96GM8 510 aaKnown RBP11.02□□□□□ -0.65
PFDN1-205ENST00000512925 CDC6Q99741 560 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 GPR174Q9BXC1 333 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 MKRN2Q9H000 416 aaKnown RBP11.02□□□□□ -0.65
PFDN1-205ENST00000512925 CCSER2Q9H7U1 834 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 DNAJC17Q9NVM6 304 aaKnown RBP11.02□□□□□ -0.65
PFDN1-205ENST00000512925 USP36Q9P275 1121 aaKnown RBP11.02□□□□□ -0.65
PFDN1-205ENST00000512925 SH3BP1Q9Y3L3 701 aa11.02□□□□□ -0.65
PFDN1-205ENST00000512925 METTL12A8MUP2 240 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms