RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 PPP1R12CQ9BZL4 782 aa17.29■□□□□ 0.36
DDX41-207ENST00000507900 MARCH5Q9NX47 278 aa17.29■□□□□ 0.36
DDX41-207ENST00000507900 ADAM28Q9UKQ2 775 aa17.29■□□□□ 0.36
DDX41-207ENST00000507900 USP3Q9Y6I4 520 aa17.29■□□□□ 0.36
DDX41-207ENST00000507900 H3BQF6 201 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 TP73O15350 636 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 TADA2AO75478 443 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 ZBED1O96006 694 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 FYNP06241 537 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 CYP2C18P33260 490 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 RFC2P35250 354 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 GJA8P48165 433 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 SULT1E1P49888 294 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 GATMP50440 423 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 PLTPP55058 493 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 MTMR3Q13615 1198 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 MRPL58Q14197 206 aaKnown RBP17.28■□□□□ 0.36
DDX41-207ENST00000507900 KRT81Q14533 505 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 DCAF6Q58WW2 860 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 ZNF365Q70YC5 407 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 RFX6Q8HWS3 928 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 SPATA2LQ8IUW3 424 aaPredicted RBP17.28■□□□□ 0.36
DDX41-207ENST00000507900 ACTL9Q8TC94 416 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 FAM118BQ9BPY3 351 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 RRN3Q9NYV6 651 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 CALCOCO1Q9P1Z2 691 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 MTRF1LQ9UGC7 380 aaKnown RBP17.28■□□□□ 0.36
DDX41-207ENST00000507900 ASIC3Q9UHC3 531 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 YJEFN3A6XGL0 299 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 E7ENQ6 273 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 ALDH2P05091 517 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 ATF2P15336 505 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 FGFR3P22607 806 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 RDXP35241 583 aaKnown RBP17.28■□□□□ 0.36
DDX41-207ENST00000507900 OTUD4Q01804 1114 aaKnown RBP17.28■□□□□ 0.36
DDX41-207ENST00000507900 CAV1Q03135 178 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 CALCOCO2Q13137 446 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 MMRN1Q13201 1228 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 CA9Q16790 459 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 ZC3H12AQ5D1E8 599 aaKnown RBP17.28■□□□□ 0.36
DDX41-207ENST00000507900 VARS2Q5ST30 1063 aaKnown RBP17.28■□□□□ 0.36
DDX41-207ENST00000507900 CNKSR3Q6P9H4 555 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 RHBDF2Q6PJF5 856 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 HFE2Q6ZVN8 426 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 BEND5Q7L4P6 421 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 DCP1BQ8IZD4 617 aaKnown RBP17.28■□□□□ 0.36
DDX41-207ENST00000507900 LRRC43Q8N309 656 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 BBOF1Q8ND07 529 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 DIS3LQ8TF46 1054 aaKnown RBP17.28■□□□□ 0.36
DDX41-207ENST00000507900 PIK3R5Q8WYR1 880 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 PGAP3Q96FM1 320 aaPredicted RBP17.28■□□□□ 0.36
DDX41-207ENST00000507900 FUBP3Q96I24 572 aaKnown RBP eCLIP17.28■□□□□ 0.36
DDX41-207ENST00000507900 SLC9A7Q96T83 725 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 MAK16Q9BXY0 300 aaKnown RBP17.28■□□□□ 0.36
DDX41-207ENST00000507900 ZNF148Q9UQR1 794 aa17.28■□□□□ 0.36
DDX41-207ENST00000507900 PLXNA3P51805 1871 aa17.27■□□□□ 0.36
DDX41-207ENST00000507900 COL4A6Q14031 1691 aa17.27■□□□□ 0.36
DDX41-207ENST00000507900 SF3B1O75533 1304 aaKnown RBP eCLIP17.27■□□□□ 0.364e-7■■■■■ 133.7
DDX41-207ENST00000507900 SYF2O95926 243 aaKnown RBP17.27■□□□□ 0.35
DDX41-207ENST00000507900 KRT14P02533 472 aa17.27■□□□□ 0.35
DDX41-207ENST00000507900 LTFP02788 710 aa17.27■□□□□ 0.35
DDX41-207ENST00000507900 TGM2P21980 687 aa17.27■□□□□ 0.35
DDX41-207ENST00000507900 OAS2P29728 719 aaKnown RBP17.27■□□□□ 0.35
DDX41-207ENST00000507900 L1CAMP32004 1257 aa17.27■□□□□ 0.35
DDX41-207ENST00000507900 SLC11A1P49279 550 aa17.27■□□□□ 0.35
DDX41-207ENST00000507900 ATXN1P54253 815 aaKnown RBP17.27■□□□□ 0.35
DDX41-207ENST00000507900 AIF1P55008 147 aa17.27■□□□□ 0.35
DDX41-207ENST00000507900 ELAVL2Q12926 359 aaKnown RBP17.27■□□□□ 0.35
DDX41-207ENST00000507900 NOMO1Q15155 1222 aa17.27■□□□□ 0.35
DDX41-207ENST00000507900 UAP1Q16222 522 aaPredicted RBP17.27■□□□□ 0.35
DDX41-207ENST00000507900 NFE2Q16621 373 aaPredicted RBP17.27■□□□□ 0.35
DDX41-207ENST00000507900 ANKRD20A8PQ5CZ79 823 aa17.27■□□□□ 0.35
DDX41-207ENST00000507900 CFAP58Q5T655 872 aa17.27■□□□□ 0.35
DDX41-207ENST00000507900 SLC9A4Q6AI14 798 aa17.27■□□□□ 0.35
DDX41-207ENST00000507900 SH3GL2Q99962 352 aa17.27■□□□□ 0.35
DDX41-207ENST00000507900 TRIM62Q9BVG3 475 aa17.27■□□□□ 0.35
DDX41-207ENST00000507900 GPATCH2LQ9NWQ4 482 aa17.27■□□□□ 0.35
DDX41-207ENST00000507900 MTMR10Q9NXD2 777 aa17.27■□□□□ 0.35
DDX41-207ENST00000507900 RCOR3Q9P2K3 495 aaPredicted RBP17.27■□□□□ 0.35
DDX41-207ENST00000507900 AP4E1Q9UPM8 1137 aa17.27■□□□□ 0.35
DDX41-207ENST00000507900 FAN1Q9Y2M0 1017 aa17.27■□□□□ 0.35
DDX41-207ENST00000507900 MYO16Q9Y6X6 1858 aa17.26■□□□□ 0.35
DDX41-207ENST00000507900 OR6C75A6NL08 312 aa17.26■□□□□ 0.35
DDX41-207ENST00000507900 USP17L7P0C7H9 530 aa17.26■□□□□ 0.35
DDX41-207ENST00000507900 HSD17B3P37058 310 aa17.26■□□□□ 0.35
DDX41-207ENST00000507900 GGCXP38435 758 aa17.26■□□□□ 0.35
DDX41-207ENST00000507900 RABGGTBP53611 331 aa17.26■□□□□ 0.35
DDX41-207ENST00000507900 DYNLT1P63172 113 aa17.26■□□□□ 0.35
DDX41-207ENST00000507900 CBX1P83916 185 aa17.26■□□□□ 0.35
DDX41-207ENST00000507900 DHX9Q08211 1270 aaKnown RBP17.26■□□□□ 0.35
DDX41-207ENST00000507900 PKN2Q16513 984 aaKnown RBP17.26■□□□□ 0.35
DDX41-207ENST00000507900 HSP90B2PQ58FF3 399 aa17.26■□□□□ 0.35
DDX41-207ENST00000507900 SYPL2Q5VXT5 272 aa17.26■□□□□ 0.35
DDX41-207ENST00000507900 CCDC185Q8N715 623 aa17.26■□□□□ 0.35
DDX41-207ENST00000507900 PQLC3Q8N755 202 aa17.26■□□□□ 0.35
DDX41-207ENST00000507900 HAUS1Q96CS2 278 aa17.26■□□□□ 0.35
DDX41-207ENST00000507900 VWCEQ96DN2 955 aa17.26■□□□□ 0.35
DDX41-207ENST00000507900 ZIM3Q96PE6 472 aa17.26■□□□□ 0.35
DDX41-207ENST00000507900 PRDM16Q9HAZ2 1276 aa17.26■□□□□ 0.35
DDX41-207ENST00000507900 PCDH9Q9HC56 1237 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms