RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 PNPLA8Q9NP80 782 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 UBE2TQ9NPD8 197 aaPredicted RBP14.99□□□□□ -0.01
HOXC9-202ENST00000504557 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.99□□□□□ -0.01
HOXC9-202ENST00000504557 TBC1D14Q9P2M4 693 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 SPAG17Q6Q759 2223 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 MYO15AQ9UKN7 3530 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 ANTXRLA6NF34 631 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 GOLGA6L22H0YM25 854 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 O00370 1275 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 ADH1CP00326 375 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 SLC9A1P19634 815 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 DRD1P21728 446 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 OPRD1P41143 372 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 GOLGA8FQ08AF8 430 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 GOLGA8DPQ0D2H9 430 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 ARHGAP44Q17R89 818 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 C2orf27AQ580R0 203 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 RHBDF2Q6PJF5 856 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 PRR23BQ6ZRT6 265 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 CCDC186Q7Z3E2 898 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 C12orf40Q86WS4 652 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 GPT2Q8TD30 523 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 BHMTQ93088 406 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 KREMEN1Q96MU8 473 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 IER2Q9BTL4 223 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 CYLDQ9NQC7 956 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 DACH1Q9UI36 760 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 DNMT3LQ9UJW3 386 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 LSM7Q9UK45 103 aaKnown RBP14.98□□□□□ -0.01
HOXC9-202ENST00000504557 SLC8A2Q9UPR5 921 aa14.98□□□□□ -0.01
HOXC9-202ENST00000504557 XPO1O14980 1071 aaKnown RBP14.97□□□□□ -0.01
HOXC9-202ENST00000504557 PMM2O15305 246 aa14.97□□□□□ -0.01
HOXC9-202ENST00000504557 ZBED1O96006 694 aa14.97□□□□□ -0.01
HOXC9-202ENST00000504557 PAEPP09466 180 aa14.97□□□□□ -0.01
HOXC9-202ENST00000504557 PRKCSHP14314 528 aaPredicted RBP14.97□□□□□ -0.01
HOXC9-202ENST00000504557 YWHAGP61981 247 aaKnown RBP eCLIP14.97□□□□□ -0.01
HOXC9-202ENST00000504557 SRSF5Q13243 272 aaKnown RBP14.97□□□□□ -0.01
HOXC9-202ENST00000504557 GAB4Q2WGN9 574 aa14.97□□□□□ -0.01
HOXC9-202ENST00000504557 GBP6Q6ZN66 633 aa14.97□□□□□ -0.01
HOXC9-202ENST00000504557 TPGS1Q6ZTW0 290 aa14.97□□□□□ -0.01
HOXC9-202ENST00000504557 TADA2BQ86TJ2 420 aa14.97□□□□□ -0.01
HOXC9-202ENST00000504557 IRF2BP1Q8IU81 584 aa14.97□□□□□ -0.01
HOXC9-202ENST00000504557 SFTPA1Q8IWL2 248 aa14.97□□□□□ -0.01
HOXC9-202ENST00000504557 SIX6OS1Q8N1H7 587 aa14.97□□□□□ -0.01
HOXC9-202ENST00000504557 SYNPOQ8N3V7 929 aa14.97□□□□□ -0.01
HOXC9-202ENST00000504557 EDEM1Q92611 657 aa14.97□□□□□ -0.01
HOXC9-202ENST00000504557 EZH1Q92800 747 aaPredicted RBP14.97□□□□□ -0.01
HOXC9-202ENST00000504557 SECISBP2LQ93073 1101 aaKnown RBP14.97□□□□□ -0.01
HOXC9-202ENST00000504557 HHIPQ96QV1 700 aa14.97□□□□□ -0.01
HOXC9-202ENST00000504557 ZSWIM1Q9BR11 485 aa14.97□□□□□ -0.01
HOXC9-202ENST00000504557 FAM124BQ9H5Z6 455 aaPredicted RBP14.97□□□□□ -0.01
HOXC9-202ENST00000504557 ZDHHC4Q9NPG8 344 aa14.97□□□□□ -0.01
HOXC9-202ENST00000504557 PCDHGA2Q9Y5H1 932 aa14.97□□□□□ -0.01
HOXC9-202ENST00000504557 USP3Q9Y6I4 520 aa14.97□□□□□ -0.01
HOXC9-202ENST00000504557 USP34Q70CQ2 3546 aa14.97□□□□□ -0.01
HOXC9-202ENST00000504557 NEDD8-MDP1E9PL57 170 aa14.96□□□□□ -0.01
HOXC9-202ENST00000504557 PSEN1P49768 467 aa14.96□□□□□ -0.01
HOXC9-202ENST00000504557 NRLP54845 237 aa14.96□□□□□ -0.01
HOXC9-202ENST00000504557 GCNT1Q02742 428 aa14.96□□□□□ -0.01
HOXC9-202ENST00000504557 GAD2Q05329 585 aa14.96□□□□□ -0.01
HOXC9-202ENST00000504557 MESP2Q0VG99 397 aa14.96□□□□□ -0.01
HOXC9-202ENST00000504557 BTBD8Q5XKL5 378 aa14.96□□□□□ -0.01
HOXC9-202ENST00000504557 TRIM65Q6PJ69 517 aa14.96□□□□□ -0.01
HOXC9-202ENST00000504557 CLEC17AQ6ZS10 378 aa14.96□□□□□ -0.01
HOXC9-202ENST00000504557 TMEM25Q86YD3 366 aa14.96□□□□□ -0.01
HOXC9-202ENST00000504557 DCLK2Q8N568 766 aa14.96□□□□□ -0.01
HOXC9-202ENST00000504557 CCDC33Q8N5R6 958 aa14.96□□□□□ -0.01
HOXC9-202ENST00000504557 ACP6Q9NPH0 428 aa14.96□□□□□ -0.01
HOXC9-202ENST00000504557 NCDNQ9UBB6 729 aa14.96□□□□□ -0.01
HOXC9-202ENST00000504557 KIAA1257Q9ULG3 409 aa14.96□□□□□ -0.01
HOXC9-202ENST00000504557 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.96□□□□□ -0.01
HOXC9-202ENST00000504557 SLC12A8A0AV02 714 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 K7ESF4 209 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 THAP12O43422 761 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 ATG13O75143 517 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 STC2O76061 302 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 LETM1O95202 739 aaPredicted RBP14.95□□□□□ -0.02
HOXC9-202ENST00000504557 APODP05090 189 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 SETSIPP0DME0 302 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 TDGF1P13385 188 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 TIE1P35590 1138 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 PLA2G4AP47712 749 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 MFAP3P55082 362 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 EXOC3L4Q17RC7 722 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 FBXO43Q4G163 708 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 RAB41Q5JT25 222 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 PMF1Q6P1K2 205 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 LCLAT1Q6UWP7 414 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 FAM114A1Q8IWE2 563 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 ARHGAP18Q8N392 663 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 ZBTB44Q8NCP5 570 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 CLEC4CQ8WTT0 213 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 RNF139Q8WU17 664 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 OTUB2Q96DC9 234 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 PNKPQ96T60 521 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 BBS2Q9BXC9 721 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 UBXN6Q9BZV1 441 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 MIS12Q9H081 205 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 SEMA4AQ9H3S1 761 aa14.95□□□□□ -0.02
HOXC9-202ENST00000504557 THAP9Q9H5L6 903 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms