RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 BST2Q10589 180 aaKnown RBP16.54■□□□□ 0.24
HDAC4-213ENST00000496347 SIM2Q14190 667 aaPredicted RBP16.54■□□□□ 0.24
HDAC4-213ENST00000496347 HSF5Q4G112 596 aaPredicted RBP16.54■□□□□ 0.24
HDAC4-213ENST00000496347 RAB41Q5JT25 222 aa16.54■□□□□ 0.24
HDAC4-213ENST00000496347 LY6G5CQ5SRR4 150 aa16.54■□□□□ 0.24
HDAC4-213ENST00000496347 PRR23BQ6ZRT6 265 aa16.54■□□□□ 0.24
HDAC4-213ENST00000496347 HTR3DQ70Z44 454 aa16.54■□□□□ 0.24
HDAC4-213ENST00000496347 PIGZQ86VD9 579 aa16.54■□□□□ 0.24
HDAC4-213ENST00000496347 ETFBKMTQ8IXQ9 262 aa16.54■□□□□ 0.24
HDAC4-213ENST00000496347 KLF16Q9BXK1 252 aaPredicted RBP16.54■□□□□ 0.24
HDAC4-213ENST00000496347 NMUR1Q9HB89 426 aa16.54■□□□□ 0.24
HDAC4-213ENST00000496347 KIAA1468Q9P260 1216 aa16.54■□□□□ 0.24
HDAC4-213ENST00000496347 HESX1Q9UBX0 185 aa16.54■□□□□ 0.24
HDAC4-213ENST00000496347 TSPAN16Q9UKR8 245 aa16.54■□□□□ 0.24
HDAC4-213ENST00000496347 KIAA1257Q9ULG3 409 aa16.54■□□□□ 0.24
HDAC4-213ENST00000496347 O00370 1275 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 XPO1O14980 1071 aaKnown RBP16.53■□□□□ 0.24
HDAC4-213ENST00000496347 GREM1O60565 184 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 LRP3O75074 770 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 KAT7O95251 611 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 APODP05090 189 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 SETSIPP0DME0 302 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 CCDC192P0DO97 292 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 IRF1P10914 325 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 RARGP13631 454 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 DMC1Q14565 340 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 C10orf120Q5SQS8 335 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 BTBD8Q5XKL5 378 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.53■□□□□ 0.24
HDAC4-213ENST00000496347 SCD5Q86SK9 330 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 C12orf40Q86WS4 652 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 TTC30AQ86WT1 665 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 KIAA2013Q8IYS2 634 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 USP33Q8TEY7 942 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 GAB3Q8WWW8 586 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 HHIPQ96QV1 700 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 PNKPQ96T60 521 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 ARHGEF4Q9NR80 690 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 SPHK2Q9NRA0 654 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 RWDD2AQ9UIY3 292 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.53■□□□□ 0.24
HDAC4-213ENST00000496347 SDK1Q7Z5N4 2213 aa16.53■□□□□ 0.24
HDAC4-213ENST00000496347 K7EQS6 105 aa16.52■□□□□ 0.24
HDAC4-213ENST00000496347 HRO43593 1189 aa16.52■□□□□ 0.24
HDAC4-213ENST00000496347 RPP40O75818 363 aaKnown RBP16.52■□□□□ 0.24
HDAC4-213ENST00000496347 TBX18O95935 607 aa16.52■□□□□ 0.24
HDAC4-213ENST00000496347 AFPP02771 609 aaKnown RBP16.52■□□□□ 0.24
HDAC4-213ENST00000496347 RETP07949 1114 aa16.52■□□□□ 0.24
HDAC4-213ENST00000496347 VDRP11473 427 aa16.52■□□□□ 0.24
HDAC4-213ENST00000496347 CD19P15391 556 aa16.52■□□□□ 0.24
HDAC4-213ENST00000496347 GRIA2P42262 883 aa16.52■□□□□ 0.24
HDAC4-213ENST00000496347 PLA2G4AP47712 749 aa16.52■□□□□ 0.24
HDAC4-213ENST00000496347 STX17P56962 302 aa16.52■□□□□ 0.24
HDAC4-213ENST00000496347 MRPS21P82921 87 aaKnown RBP16.52■□□□□ 0.24
HDAC4-213ENST00000496347 LRMPQ12912 555 aa16.52■□□□□ 0.24
HDAC4-213ENST00000496347 STILQ15468 1287 aa16.52■□□□□ 0.24
HDAC4-213ENST00000496347 TMEM270Q6UE05 265 aa16.52■□□□□ 0.24
HDAC4-213ENST00000496347 PPM1KQ8N3J5 372 aa16.52■□□□□ 0.24
HDAC4-213ENST00000496347 DCLK2Q8N568 766 aa16.52■□□□□ 0.24
HDAC4-213ENST00000496347 LMO3Q8TAP4 145 aa16.52■□□□□ 0.24
HDAC4-213ENST00000496347 MARK1Q9P0L2 795 aa16.52■□□□□ 0.24
HDAC4-213ENST00000496347 EBF1Q9UH73 591 aa16.52■□□□□ 0.24
HDAC4-213ENST00000496347 MMP17Q9ULZ9 603 aa16.52■□□□□ 0.24
HDAC4-213ENST00000496347 PLXND1Q9Y4D7 1925 aa16.52■□□□□ 0.23
HDAC4-213ENST00000496347 LAMA1P25391 3075 aa16.51■□□□□ 0.23
HDAC4-213ENST00000496347 A0A0A0MRY4 1105 aa16.51■□□□□ 0.23
HDAC4-213ENST00000496347 CACNG3O60359 315 aa16.51■□□□□ 0.23
HDAC4-213ENST00000496347 ZBED1O96006 694 aa16.51■□□□□ 0.23
HDAC4-213ENST00000496347 CHRM1P11229 460 aaPredicted RBP16.51■□□□□ 0.23
HDAC4-213ENST00000496347 TKTL1P51854 596 aa16.51■□□□□ 0.23
HDAC4-213ENST00000496347 SEC13P55735 322 aa16.51■□□□□ 0.23
HDAC4-213ENST00000496347 LMNB2Q03252 620 aa16.51■□□□□ 0.23
HDAC4-213ENST00000496347 KDSRQ06136 332 aa16.51■□□□□ 0.23
HDAC4-213ENST00000496347 PDE4CQ08493 712 aa16.51■□□□□ 0.23
HDAC4-213ENST00000496347 KCNH2Q12809 1159 aa16.51■□□□□ 0.23
HDAC4-213ENST00000496347 SRSF5Q13243 272 aaKnown RBP16.51■□□□□ 0.23
HDAC4-213ENST00000496347 Q6ZNB5 142 aa16.51■□□□□ 0.23
HDAC4-213ENST00000496347 CEP68Q76N32 757 aa16.51■□□□□ 0.23
HDAC4-213ENST00000496347 PHTF2Q8N3S3 785 aa16.51■□□□□ 0.23
HDAC4-213ENST00000496347 TSTD1Q8NFU3 115 aa16.51■□□□□ 0.23
HDAC4-213ENST00000496347 DEC1Q9P2X7 70 aa16.51■□□□□ 0.23
HDAC4-213ENST00000496347 STRIP2Q9ULQ0 834 aa16.51■□□□□ 0.23
HDAC4-213ENST00000496347 ZNF510Q9Y2H8 683 aa16.51■□□□□ 0.23
HDAC4-213ENST00000496347 MDM4O15151 490 aa16.5■□□□□ 0.23
HDAC4-213ENST00000496347 AXIN1O15169 862 aa16.5■□□□□ 0.23
HDAC4-213ENST00000496347 TULP3O75386 442 aa16.5■□□□□ 0.23
HDAC4-213ENST00000496347 STC2O76061 302 aa16.5■□□□□ 0.23
HDAC4-213ENST00000496347 TNFRSF4P43489 277 aa16.5■□□□□ 0.23
HDAC4-213ENST00000496347 DGKEP52429 567 aa16.5■□□□□ 0.23
HDAC4-213ENST00000496347 ZNF132P52740 706 aa16.5■□□□□ 0.23
HDAC4-213ENST00000496347 YWHAGP61981 247 aaKnown RBP eCLIP16.5■□□□□ 0.23
HDAC4-213ENST00000496347 COG7P83436 770 aa16.5■□□□□ 0.23
HDAC4-213ENST00000496347 ADIGQ0VDE8 80 aa16.5■□□□□ 0.23
HDAC4-213ENST00000496347 CAMK4Q16566 473 aa16.5■□□□□ 0.23
HDAC4-213ENST00000496347 LPAL2Q16609 132 aa16.5■□□□□ 0.23
HDAC4-213ENST00000496347 ANO4Q32M45 955 aa16.5■□□□□ 0.23
HDAC4-213ENST00000496347 PKDCCQ504Y2 493 aa16.5■□□□□ 0.23
HDAC4-213ENST00000496347 C2orf27AQ580R0 203 aa16.5■□□□□ 0.23
HDAC4-213ENST00000496347 PM20D1Q6GTS8 502 aa16.5■□□□□ 0.23
HDAC4-213ENST00000496347 LCLAT1Q6UWP7 414 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms