RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 MIPP30301 263 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 FDFT1P37268 417 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 CDH6P55285 790 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 WNT7BP56706 349 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 RBP5P82980 135 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 SP2Q02086 613 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 OGDHQ02218 1023 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 FASTKD3Q14CZ7 662 aaKnown RBP11.93□□□□□ -0.5
RFC4-214ENST00000494047 PRKD1Q15139 912 aaPredicted RBP11.93□□□□□ -0.5
RFC4-214ENST00000494047 C2CD6Q53TS8 623 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 CELF3Q5SZQ8 465 aaKnown RBP11.93□□□□□ -0.5
RFC4-214ENST00000494047 KYAT3Q6YP21 454 aaKnown RBP11.93□□□□□ -0.5
RFC4-214ENST00000494047 PLEKHH3Q7Z736 793 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 UNC93AQ86WB7 457 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 VPS52Q8N1B4 723 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 WDTC1Q8N5D0 677 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 FAF2Q96CS3 445 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 NAF1Q96HR8 494 aaKnown RBP11.93□□□□□ -0.5
RFC4-214ENST00000494047 RNF157Q96PX1 679 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 PCYT2Q99447 389 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 NT5C1AQ9BXI3 368 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 TBC1D10AQ9BXI6 508 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 CALN1Q9BXU9 219 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 SPATC1LQ9H0A9 340 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 ZWILCHQ9H900 591 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 PLEKHA5Q9HAU0 1116 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 TXNRD2Q9NNW7 524 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 EIF2B3Q9NR50 452 aaKnown RBP11.93□□□□□ -0.5
RFC4-214ENST00000494047 MRGBPQ9NV56 204 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 SLC5A4Q9NY91 659 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 GJD2Q9UKL4 321 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 ANGPTL2Q9UKU9 493 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 CORO1CQ9ULV4 474 aaPredicted RBP11.93□□□□□ -0.5
RFC4-214ENST00000494047 GABRQQ9UN88 632 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 PDE4DIPQ5VU43 2346 aa11.93□□□□□ -0.5
RFC4-214ENST00000494047 TCRBV9S1A1TA0A576 114 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 C2CD4BA6NLJ0 364 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 INO80B-WBP1J3KQ70 363 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 AP3B1O00203 1094 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 STRNO43815 780 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 DIAPH2O60879 1101 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 MICAL2O94851 1124 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 CFHP08603 1231 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 ATP6V1C1P21283 382 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 TARSP26639 723 aaKnown RBP11.92□□□□□ -0.5
RFC4-214ENST00000494047 SDC4P31431 198 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 VHLP40337 213 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 ETV4P43268 484 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 GPD2P43304 727 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 PTPN9P43378 593 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 ACADSBP45954 432 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 ZNF135P52742 658 aaPredicted RBP11.92□□□□□ -0.5
RFC4-214ENST00000494047 BCAR1P56945 870 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 YWHAGP61981 247 aaKnown RBP eCLIP11.92□□□□□ -0.5
RFC4-214ENST00000494047 IRX4P78413 519 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 TTLL4Q14679 1199 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 TMEM132DQ14C87 1099 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 LLGL1Q15334 1064 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 TAF11Q15544 211 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 SLC1A5Q15758 541 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 TRMT5Q32P41 509 aaKnown RBP11.92□□□□□ -0.5
RFC4-214ENST00000494047 Q3C1V9 767 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 CCDC14Q49A88 953 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 TAF1BQ53T94 588 aaPredicted RBP11.92□□□□□ -0.5
RFC4-214ENST00000494047 ZBTB41Q5SVQ8 909 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 SLC9A4Q6AI14 798 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 DENND1BQ6P3S1 775 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 TIFABQ6ZNK6 161 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 PHLDB2Q86SQ0 1253 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 ZBTB33Q86T24 672 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 TMPRSS6Q8IU80 811 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 SHCBP1Q8NEM2 672 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 GSDMBQ8TAX9 411 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 TFAP2BQ92481 460 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 SKA1Q96BD8 255 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 NUDCD1Q96RS6 583 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 GPR20Q99678 358 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 INO80BQ9C086 356 aaPredicted RBP11.92□□□□□ -0.5
RFC4-214ENST00000494047 SDCBP2Q9H190 292 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 CDT1Q9H211 546 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 C1orf21Q9H246 121 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 VCX3BQ9H321 246 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 MROH8Q9H579 483 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 NPHS2Q9NP85 383 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 KLHL11Q9NVR0 708 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 HESX1Q9UBX0 185 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 ZNF212Q9UDV6 495 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 GTF2IRD1Q9UHL9 959 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 MID2Q9UJV3 735 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 RAD54BQ9Y620 910 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 HTTP42858 3142 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 PLXNA1Q9UIW2 1896 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 KBTBD13C9JR72 458 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 H7C0C1 242 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 GYG2O15488 501 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 XPOTO43592 962 aaKnown RBP11.92□□□□□ -0.5
RFC4-214ENST00000494047 GCATO75600 419 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 CNMDO75829 334 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 CIB2O75838 187 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 APOEP02649 317 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms