RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 PHC3Q8NDX5 983 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 CENPIQ92674 756 aaPredicted RBP10.55□□□□□ -0.72
COL12A1-207ENST00000483888 TRIM54Q9BYV2 358 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 APEX2Q9UBZ4 518 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 TNPO2O14787 897 aaKnown RBP10.55□□□□□ -0.72
COL12A1-207ENST00000483888 MYL12BO14950 172 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 DCXO43602 365 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 S100A2P29034 98 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 AVPR1AP37288 418 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 NCALDP61601 193 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 BST2Q10589 180 aaKnown RBP10.55□□□□□ -0.72
COL12A1-207ENST00000483888 KRT33BQ14525 404 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 FAM102AQ5T9C2 384 aaPredicted RBP10.55□□□□□ -0.72
COL12A1-207ENST00000483888 BICRALQ6AI39 1079 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 AMIGO2Q86SJ2 522 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 ZSCAN5AQ9BUG6 496 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 PHF8Q9UPP1 1060 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 PARP6Q2NL67 630 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 PLA2G4EQ3MJ16 856 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 SLC4A9Q96Q91 983 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 CHORDC1Q9UHD1 332 aaPredicted RBP10.55□□□□□ -0.72
COL12A1-207ENST00000483888 UBE2QL1A1L167 161 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 TSPAN19P0C672 248 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 FOSL1P15407 271 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 ITGALP20701 1170 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 NT5C2P49902 561 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 SURF1Q15526 300 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 SLFN12LQ6IEE8 588 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 PMF1Q6P1K2 205 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 KLHL24Q6TFL4 600 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 CKAP2Q8WWK9 683 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 SLC24A2Q9UI40 661 aa10.55□□□□□ -0.72
COL12A1-207ENST00000483888 RPL26L1Q9UNX3 145 aaKnown RBP10.55□□□□□ -0.72
COL12A1-207ENST00000483888 M0QZ92 97 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 DDX3XO00571 662 aaKnown RBP eCLIP10.54□□□□□ -0.72
COL12A1-207ENST00000483888 PEX3P56589 373 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 DGKDQ16760 1214 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 SGO1Q5FBB7 561 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 PAGE2Q7Z2X7 111 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 MSTO1Q9BUK6 570 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 CD274Q9NZQ7 290 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 SF3B1O75533 1304 aaKnown RBP eCLIP10.54□□□□□ -0.72
COL12A1-207ENST00000483888 I3L521 148 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 PRKCBP05771 671 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 ZNF699Q32M78 642 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 ZNF613Q6PF04 617 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 CD302Q8IX05 232 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 SCFD2Q8WU76 684 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 FIG4Q92562 907 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 SYN2Q92777 582 aaPredicted RBP10.54□□□□□ -0.72
COL12A1-207ENST00000483888 COA7Q96BR5 231 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 ZFYVE28Q9HCC9 887 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 SLCO1B7G3V0H7 640 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 VCLP18206 1134 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 SDC4P31431 198 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 USP39Q53GS9 565 aaKnown RBP10.54□□□□□ -0.72
COL12A1-207ENST00000483888 SLC13A5Q86YT5 568 aaPredicted RBP10.54□□□□□ -0.72
COL12A1-207ENST00000483888 HPS3Q969F9 1004 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 ZNF521Q96K83 1311 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 SPTLC1O15269 473 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 ETFBP38117 255 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 PIGHQ14442 188 aaPredicted RBP10.54□□□□□ -0.72
COL12A1-207ENST00000483888 TTC29Q8NA56 475 aaPredicted RBP10.54□□□□□ -0.72
COL12A1-207ENST00000483888 ZNF333Q96JL9 665 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 GSTK1Q9Y2Q3 226 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 FLT1P17948 1338 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 MYH1P12882 1939 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 MYH2Q9UKX2 1941 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 MYH4Q9Y623 1939 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 KHDRBS3O75525 346 aaKnown RBP10.54□□□□□ -0.72
COL12A1-207ENST00000483888 EFL1Q7Z2Z2 1120 aaKnown RBP10.54□□□□□ -0.72
COL12A1-207ENST00000483888 CCNJLQ8IV13 435 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 DPP10Q8N608 796 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 FAM71DQ8N9W8 422 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 PDPRQ8NCN5 879 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 FBXO36Q8NEA4 188 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 CLHC1Q8NHS4 586 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.54□□□□□ -0.72
COL12A1-207ENST00000483888 PTCH1Q13635 1447 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 PLEKHG1Q9ULL1 1385 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 ZSCAN5BA6NJL1 495 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 GARTP22102 1010 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 TNFRSF8P28908 595 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 RBM20Q5T481 1227 aaKnown RBP10.54□□□□□ -0.72
COL12A1-207ENST00000483888 ENOSF1Q7L5Y1 443 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 SFRP1Q8N474 314 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 RNF139Q8WU17 664 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 MCEEQ96PE7 176 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 TMCC3Q9ULS5 477 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 SLC9A8Q9Y2E8 581 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 KDM4BO94953 1096 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 SOAT1P35610 550 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 UBE2SQ16763 222 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 ZIK1Q3SY52 487 aaPredicted RBP10.54□□□□□ -0.72
COL12A1-207ENST00000483888 C6orf52Q5T4I8 152 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 DGKHQ86XP1 1220 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 HSPBAP1Q96EW2 488 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 CEP170P1Q96L14 293 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 NSMCE2Q96MF7 247 aa10.54□□□□□ -0.72
COL12A1-207ENST00000483888 COPS4Q9BT78 406 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms