RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 RAB30Q15771 203 aa7.25□□□□□ -1.25
CLK1-212ENST00000482590 FSCN1Q16658 493 aaKnown RBP7.25□□□□□ -1.25
CLK1-212ENST00000482590 PAN2Q504Q3 1202 aaKnown RBP7.25□□□□□ -1.25
CLK1-212ENST00000482590 C4orf50Q6ZRC1 276 aa7.25□□□□□ -1.25
CLK1-212ENST00000482590 FKBP9P1Q75LS8 142 aa7.25□□□□□ -1.25
CLK1-212ENST00000482590 RASGRP2Q7LDG7 609 aa7.25□□□□□ -1.25
CLK1-212ENST00000482590 FBXO16Q8IX29 292 aaPredicted RBP7.25□□□□□ -1.25
CLK1-212ENST00000482590 MYCT1Q8N699 235 aa7.25□□□□□ -1.25
CLK1-212ENST00000482590 STPG3Q8N7X2 389 aa7.25□□□□□ -1.25
CLK1-212ENST00000482590 DCAF4Q8WV16 495 aa7.25□□□□□ -1.25
CLK1-212ENST00000482590 ATRIPQ8WXE1 791 aa7.25□□□□□ -1.25
CLK1-212ENST00000482590 FAM193BQ96PV7 902 aaPredicted RBP7.25□□□□□ -1.25
CLK1-212ENST00000482590 LRRC37BQ96QE4 947 aa7.25□□□□□ -1.25
CLK1-212ENST00000482590 KATNBL1Q9H079 304 aa7.25□□□□□ -1.25
CLK1-212ENST00000482590 ARFGAP3Q9NP61 516 aa7.25□□□□□ -1.25
CLK1-212ENST00000482590 VTA1Q9NP79 307 aa7.25□□□□□ -1.25
CLK1-212ENST00000482590 ADD3Q9UEY8 706 aaKnown RBP7.25□□□□□ -1.25
CLK1-212ENST00000482590 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.25□□□□□ -1.25
CLK1-212ENST00000482590 MRFAP1Q9Y605 127 aa7.25□□□□□ -1.25
CLK1-212ENST00000482590 TCRBV16S1A1N1A0A5B0 115 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 PTPDC1A2A3K4 754 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 TOR1BO14657 336 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 AREL1O15033 823 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 PCDHGA12O60330 932 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 DLX3O60479 287 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 NMT2O60551 498 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 ICAM1P05362 532 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 CDK7P50613 346 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 IL2P60568 153 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 KRT83P78385 493 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 ITGA7Q13683 1181 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 HS1BP3Q53T59 392 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 MUM1L1Q5H9M0 696 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 DGKKQ5KSL6 1271 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 PIK3R6Q5UE93 754 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 KIAA1614Q5VZ46 1190 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 PGM2L1Q6PCE3 622 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 CXCL17Q6UXB2 119 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 LMNTD2Q8IXW0 634 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 LSMEM1Q8N8F7 131 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 UHMK1Q8TAS1 419 aaKnown RBP7.24□□□□□ -1.25
CLK1-212ENST00000482590 OTUD7AQ8TE49 926 aaPredicted RBP7.24□□□□□ -1.25
CLK1-212ENST00000482590 HDAC2Q92769 488 aaKnown RBP7.24□□□□□ -1.25
CLK1-212ENST00000482590 PHF20Q9BVI0 1012 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 HIPK3Q9H422 1215 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 ATP6V0A4Q9HBG4 840 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 IL23AQ9NPF7 189 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 HELLSQ9NRZ9 838 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 CYP39A1Q9NYL5 469 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 NKIRAS2Q9NYR9 191 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 ARHGAP20Q9P2F6 1191 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 MSRAQ9UJ68 235 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 TELO2Q9Y4R8 837 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 PCDHGA9Q9Y5G4 932 aaKnown RBP7.24□□□□□ -1.25
CLK1-212ENST00000482590 PCDHGA8Q9Y5G5 932 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 PCDHGA7Q9Y5G6 932 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 PCDHGA6Q9Y5G7 932 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 PCDHGA3Q9Y5H0 932 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 PCDHGA2Q9Y5H1 932 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 ASTN1O14525 1302 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 RAD50Q92878 1312 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 TRANK1O15050 2925 aa7.24□□□□□ -1.25
CLK1-212ENST00000482590 CHD9Q3L8U1 2897 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 ZNF891A8MT65 544 aaPredicted RBP7.23□□□□□ -1.25
CLK1-212ENST00000482590 CTAGE5O15320 804 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 OFD1O75665 1012 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 GFPT2O94808 682 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 COL6A2P12110 1019 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 PSMA3P25788 255 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 CYP2C18P33260 490 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 UBA7P41226 1012 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 LSSP48449 732 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 CPT1AP50416 773 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 RRP1P56182 461 aaKnown RBP7.23□□□□□ -1.25
CLK1-212ENST00000482590 SNAP25P60880 206 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 DSG1Q02413 1049 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 FOXE3Q13461 319 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 PRKD1Q15139 912 aaPredicted RBP7.23□□□□□ -1.25
CLK1-212ENST00000482590 ANKRD45Q5TZF3 282 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 CD276Q5ZPR3 534 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 SWSAP1Q6NVH7 229 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 ZCCHC8Q6NZY4 707 aaKnown RBP7.23□□□□□ -1.25
CLK1-212ENST00000482590 USP53Q70EK8 1073 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 ZNF365Q70YC5 407 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 SNX32Q86XE0 403 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 FAM156AQ8NDB6 213 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 MAGEB10Q96LZ2 347 aaPredicted RBP7.23□□□□□ -1.25
CLK1-212ENST00000482590 TBCBQ99426 244 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 RANBP17Q9H2T7 1088 aaKnown RBP7.23□□□□□ -1.25
CLK1-212ENST00000482590 SLC28A3Q9HAS3 691 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 IL17RBQ9NRM6 502 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 ZFR2Q9UPR6 939 aaKnown RBP7.23□□□□□ -1.25
CLK1-212ENST00000482590 CRYL1Q9Y2S2 319 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 Q9Y3F1 56 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 ZMYM6O95789 1325 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 UMODL1Q5DID0 1318 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 SALL3Q9BXA9 1300 aa7.23□□□□□ -1.25
CLK1-212ENST00000482590 BAZ2BQ9UIF8 2168 aaKnown RBP7.22□□□□□ -1.25
CLK1-212ENST00000482590 RALGAPA2Q2PPJ7 1873 aa7.22□□□□□ -1.25
CLK1-212ENST00000482590 A0A0D9SFI3 127 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms