RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 CENPIQ92674 756 aaPredicted RBP21.29■■□□□ 1
CDHR3-210ENST00000474330 RPGRIP1Q96KN7 1286 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 SPATA17Q96L03 361 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 SLC27A5Q9Y2P5 690 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 MYO7AQ13402 2215 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 CTAGE15A4D2H0 777 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 LTFP02788 710 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 CTAGE8P0CG41 777 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 PYGMP11217 842 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 GPR15P49685 360 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 TERF1P54274 439 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 RPL10AP62906 217 aaKnown RBP21.29■■□□□ 1
CDHR3-210ENST00000474330 SLC25A11Q02978 314 aaKnown RBP21.29■■□□□ 1
CDHR3-210ENST00000474330 CREMQ03060 361 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 UBE3AQ05086 875 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 SH3PXD2AQ5TCZ1 1133 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 HFE2Q6ZVN8 426 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 CTAGE6Q86UF2 777 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 CTAGE4Q8IX94 777 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 CEP295NLQ96MC4 621 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 RXFP1Q9HBX9 757 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 ALG13Q9NP73 1137 aaKnown RBP21.29■■□□□ 1
CDHR3-210ENST00000474330 IL37Q9NZH6 218 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 EHD2Q9NZN4 543 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 MUC3AQ02505 3323 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 GREB1Q4ZG55 1949 aa21.29■■□□□ 1
CDHR3-210ENST00000474330 FYNP06241 537 aa21.28■■□□□ 1
CDHR3-210ENST00000474330 ATF2P15336 505 aa21.28■■□□□ 1
CDHR3-210ENST00000474330 MIPP30301 263 aa21.28■■□□□ 1
CDHR3-210ENST00000474330 TUFMP49411 452 aaKnown RBP21.28■■□□□ 1
CDHR3-210ENST00000474330 ATP11AP98196 1134 aa21.28■■□□□ 1
CDHR3-210ENST00000474330 ITIH3Q06033 890 aa21.28■■□□□ 1
CDHR3-210ENST00000474330 ZNF211Q13398 564 aaPredicted RBP21.28■■□□□ 1
CDHR3-210ENST00000474330 BEND5Q7L4P6 421 aa21.28■■□□□ 1
CDHR3-210ENST00000474330 STRADAQ7RTN6 431 aa21.28■■□□□ 1
CDHR3-210ENST00000474330 LRRN4CLQ8ND94 238 aa21.28■■□□□ 1
CDHR3-210ENST00000474330 FAM172AQ8WUF8 416 aa21.28■■□□□ 1
CDHR3-210ENST00000474330 NT5C3BQ969T7 300 aa21.28■■□□□ 1
CDHR3-210ENST00000474330 SEPT5Q99719 369 aaPredicted RBP21.28■■□□□ 1
CDHR3-210ENST00000474330 FBXO44Q9H4M3 255 aa21.28■■□□□ 1
CDHR3-210ENST00000474330 STAP1Q9ULZ2 295 aa21.28■■□□□ 1
CDHR3-210ENST00000474330 PLXNA3P51805 1871 aa21.27■■□□□ 1
CDHR3-210ENST00000474330 KRT7P08729 469 aa21.27■■□□□ 1
CDHR3-210ENST00000474330 CLUL1Q15846 466 aa21.27■■□□□ 1
CDHR3-210ENST00000474330 CDO1Q16878 200 aa21.27■■□□□ 1
CDHR3-210ENST00000474330 SLC25A52Q3SY17 297 aa21.27■■□□□ 1
CDHR3-210ENST00000474330 DCAF6Q58WW2 860 aa21.27■■□□□ 1
CDHR3-210ENST00000474330 SEL1L2Q5TEA6 688 aa21.27■■□□□ 1
CDHR3-210ENST00000474330 SDHAF4Q5VUM1 108 aa21.27■■□□□ 1
CDHR3-210ENST00000474330 EXD1Q8NHP7 514 aa21.27■■□□□ 1
CDHR3-210ENST00000474330 AUTS2Q8WXX7 1259 aa21.27■■□□□ 1
CDHR3-210ENST00000474330 GOLGA1Q92805 767 aa21.27■■□□□ 1
CDHR3-210ENST00000474330 NPY6RQ99463 290 aa21.27■■□□□ 1
CDHR3-210ENST00000474330 TRIM62Q9BVG3 475 aa21.27■■□□□ 1
CDHR3-210ENST00000474330 NGRNQ9NPE2 291 aaKnown RBP21.27■■□□□ 1
CDHR3-210ENST00000474330 COMMD8Q9NX08 183 aa21.27■■□□□ 1
CDHR3-210ENST00000474330 DDX56Q9NY93 547 aaKnown RBP21.27■■□□□ 1
CDHR3-210ENST00000474330 USP18Q9UMW8 372 aa21.27■■□□□ 1
CDHR3-210ENST00000474330 ZNF638Q14966 1978 aaKnown RBP21.27■■□□□ 1
CDHR3-210ENST00000474330 MYO16Q9Y6X6 1858 aa21.27■■□□□ 1
CDHR3-210ENST00000474330 FAM92AA1XBS5 289 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 PGRMC1O00264 195 aaKnown RBP21.26■□□□□ 0.99
CDHR3-210ENST00000474330 CAPN9O14815 690 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 GRM6O15303 877 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 ZRANB2O95218 330 aaKnown RBP eCLIP21.26■□□□□ 0.99
CDHR3-210ENST00000474330 TRUB2O95900 331 aaKnown RBP21.26■□□□□ 0.99
CDHR3-210ENST00000474330 IL1R2P27930 398 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 HDAC4P56524 1084 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 ATP13A4Q4VNC1 1196 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 BSPRYQ5W0U4 402 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 TXNRD3NBQ6F5E7 133 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 DENND5BQ6ZUT9 1274 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 BNIPLQ7Z465 357 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 SPPL3Q8TCT6 385 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 MRPL38Q96DV4 380 aaKnown RBP21.26■□□□□ 0.99
CDHR3-210ENST00000474330 SMARCAL1Q9NZC9 954 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 MAFFQ9ULX9 164 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 NAALADL1Q9UQQ1 740 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 SCML2Q9UQR0 700 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 EFCAB8A8MWE9 144 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 TADA3O75528 432 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 SOAT2O75908 522 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 ENDOD1O94919 500 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 RTN3O95197 1032 aaPredicted RBP21.26■□□□□ 0.99
CDHR3-210ENST00000474330 TFE3P19532 575 aaPredicted RBP21.26■□□□□ 0.99
CDHR3-210ENST00000474330 GTF2F1P35269 517 aaKnown RBP eCLIP21.26■□□□□ 0.99
CDHR3-210ENST00000474330 GJC1P36383 396 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 CAMK1Q14012 370 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 RAB6CQ53S08 254 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 SYPL2Q5VXT5 272 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 TMC7Q7Z402 723 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 RCOR2Q8IZ40 523 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 SPATA4Q8NEY3 305 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 POF1BQ8WVV4 589 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 TBCBQ99426 244 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 TCF25Q9BQ70 676 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 ADAM33Q9BZ11 813 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 RAB6CQ9H0N0 254 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 TLR9Q9NR96 1032 aa21.26■□□□□ 0.99
CDHR3-210ENST00000474330 RRN3Q9NYV6 651 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms