RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 LBHD1Q9BQE6 289 aaPredicted RBP11.68□□□□□ -0.54
COPS7B-217ENST00000461350 LPIN3Q9BQK8 851 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 MRPL45Q9BRJ2 306 aaKnown RBP11.68□□□□□ -0.54
COPS7B-217ENST00000461350 UBN1Q9NPG3 1134 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 ZNF148Q9UQR1 794 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 TRIM17Q9Y577 477 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 A6NHS1 94 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 TLR3O15455 904 aaKnown RBP11.68□□□□□ -0.54
COPS7B-217ENST00000461350 T-ENOLP0DO92 83 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 P4HA1P13674 534 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 YWHAEP62258 255 aaKnown RBP11.68□□□□□ -0.54
COPS7B-217ENST00000461350 PTPN11Q06124 597 aaPredicted RBP11.68□□□□□ -0.54
COPS7B-217ENST00000461350 MGAT3Q09327 533 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 PTP4A2Q12974 167 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 FASTKD3Q14CZ7 662 aaKnown RBP11.68□□□□□ -0.54
COPS7B-217ENST00000461350 PDK4Q16654 411 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 THEMIS2Q5TEJ8 643 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 FYB2Q5VWT5 728 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 LHX8Q68G74 356 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 NLRP9Q7RTR0 991 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 NT5DC4Q86YG4 428 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 ZCCHC9Q8N567 271 aaKnown RBP11.68□□□□□ -0.54
COPS7B-217ENST00000461350 VRTNQ9H8Y1 702 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 EURLQ9NYK6 297 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 CYTH4Q9UIA0 394 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 DCTN4Q9UJW0 460 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 GRID1Q9ULK0 1009 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 PADI3Q9ULW8 664 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 SMG5Q9UPR3 1016 aaKnown RBP11.68□□□□□ -0.54
COPS7B-217ENST00000461350 E7ENQ6 273 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 PI4K2BG5E9Z4 385 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 SPTLC1O15269 473 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 ATF7P17544 494 aaPredicted RBP11.68□□□□□ -0.54
COPS7B-217ENST00000461350 ATP6V1C1P21283 382 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 GRK4P32298 578 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 MLH1P40692 756 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 SLC1A5Q15758 541 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 CEP128Q6ZU80 1094 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 RHOT1Q8IXI2 618 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 PXYLP1Q8TE99 480 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 DNAJC9Q8WXX5 260 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 TMEM176AQ96HP8 235 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 DENND2DQ9H6A0 471 aaPredicted RBP11.68□□□□□ -0.54
COPS7B-217ENST00000461350 HMX1Q9NP08 348 aaPredicted RBP11.68□□□□□ -0.54
COPS7B-217ENST00000461350 FAM105AQ9NUU6 356 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 NME7Q9Y5B8 376 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 PDCD11Q14690 1871 aaKnown RBP11.67□□□□□ -0.54
COPS7B-217ENST00000461350 PIK3R2O00459 728 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 PTGESO14684 152 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 MGEA5O60502 916 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 SMIM24O75264 130 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 ABHD2P08910 425 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 ZSCAN5DPP0CG00 497 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 CETN2P41208 172 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 TAS2R40P59535 323 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 ZNF618Q5T7W0 954 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 LVRNQ6Q4G3 990 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 ZBED8Q8IZ13 594 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 TMEM35BQ8NCS4 154 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.67□□□□□ -0.54
COPS7B-217ENST00000461350 UBA3Q8TBC4 463 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 DENND1AQ8TEH3 1009 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 C10orf82Q8WW14 230 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 GLT1D1Q96MS3 346 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 GAD1Q99259 594 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 SH3GL3Q99963 347 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 UBQLN1Q9UMX0 589 aaKnown RBP11.67□□□□□ -0.54
COPS7B-217ENST00000461350 DERAQ9Y315 318 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 LAMA2P24043 3122 aaKnown RBP11.67□□□□□ -0.54
COPS7B-217ENST00000461350 PROSCO94903 275 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 MMP8P22894 467 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 RPL7AP62424 266 aaKnown RBP11.67□□□□□ -0.54
COPS7B-217ENST00000461350 MRPS35P82673 323 aaKnown RBP11.67□□□□□ -0.54
COPS7B-217ENST00000461350 GPS1Q13098 491 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 KLF1Q13351 362 aaPredicted RBP11.67□□□□□ -0.54
COPS7B-217ENST00000461350 MAMLD1Q13495 774 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 WASHC2DQ5SRD0 308 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 OTOAQ7RTW8 1153 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 ACOT1Q86TX2 421 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 MTDHQ86UE4 582 aaKnown RBP11.67□□□□□ -0.54
COPS7B-217ENST00000461350 PHF13Q86YI8 300 aaPredicted RBP11.67□□□□□ -0.54
COPS7B-217ENST00000461350 GLIS1Q8NBF1 620 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 TSC22D3Q99576 134 aa11.67□□□□□ -0.54
COPS7B-217ENST00000461350 BARX2Q9UMQ3 279 aaPredicted RBP11.67□□□□□ -0.54
COPS7B-217ENST00000461350 A0A1W2PPM1 405 aa11.66□□□□□ -0.54
COPS7B-217ENST00000461350 PRPF4O43172 522 aaKnown RBP eCLIP11.66□□□□□ -0.54
COPS7B-217ENST00000461350 KRT10P13645 584 aa11.66□□□□□ -0.54
COPS7B-217ENST00000461350 PECAM1P16284 738 aaPredicted RBP11.66□□□□□ -0.54
COPS7B-217ENST00000461350 GCAP28676 217 aa11.66□□□□□ -0.54
COPS7B-217ENST00000461350 PTPN4P29074 926 aa11.66□□□□□ -0.54
COPS7B-217ENST00000461350 ARSEP51690 589 aa11.66□□□□□ -0.54
COPS7B-217ENST00000461350 KLC1Q07866 573 aa11.66□□□□□ -0.54
COPS7B-217ENST00000461350 FBXO47Q5MNV8 452 aa11.66□□□□□ -0.54
COPS7B-217ENST00000461350 LIN9Q5TKA1 542 aa11.66□□□□□ -0.54
COPS7B-217ENST00000461350 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.66□□□□□ -0.54
COPS7B-217ENST00000461350 TTC25Q96NG3 672 aa11.66□□□□□ -0.54
COPS7B-217ENST00000461350 CYP3A43Q9HB55 503 aa11.66□□□□□ -0.54
COPS7B-217ENST00000461350 AVENQ9NQS1 362 aaPredicted RBP11.66□□□□□ -0.54
COPS7B-217ENST00000461350 FAM49BQ9NUQ9 324 aa11.66□□□□□ -0.54
COPS7B-217ENST00000461350 MICAL2O94851 1124 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms