RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 PABPC3Q9H361 631 aaKnown RBP8.4□□□□□ -1.06
SFPQ-202ENST00000460428 PLEKHA4Q9H4M7 779 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 NRDE2Q9H7Z3 1164 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 POPDC2Q9HBU9 364 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 PCDH9Q9HC56 1237 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 NGRNQ9NPE2 291 aaKnown RBP8.4□□□□□ -1.06
SFPQ-202ENST00000460428 DMAP1Q9NPF5 467 aaPredicted RBP8.4□□□□□ -1.06
SFPQ-202ENST00000460428 AAASQ9NRG9 546 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.4□□□□□ -1.06
SFPQ-202ENST00000460428 TMEM30AQ9NV96 361 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 KLHL11Q9NVR0 708 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 IL37Q9NZH6 218 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 PCDHB7Q9Y5E2 793 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 PTPRDP23468 1912 aa8.4□□□□□ -1.06
SFPQ-202ENST00000460428 PATJQ8NI35 1801 aa8.4□□□□□ -1.07
SFPQ-202ENST00000460428 TTC3P53804 2025 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 SF3B1O75533 1304 aaKnown RBP eCLIP8.39□□□□□ -1.072e-6■□□□□ 10.9
SFPQ-202ENST00000460428 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.39□□□□□ -1.07
SFPQ-202ENST00000460428 BCLAF3A2AJT9 711 aaKnown RBP8.39□□□□□ -1.07
SFPQ-202ENST00000460428 CFAP69A5D8W1 941 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 I3L4J1 428 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 DNALI1O14645 258 aaPredicted RBP8.39□□□□□ -1.07
SFPQ-202ENST00000460428 TNFRSF10BO14763 440 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 NRP1O14786 923 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 ZNF189O75820 626 aaPredicted RBP8.39□□□□□ -1.07
SFPQ-202ENST00000460428 ZBED1O96006 694 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 IGLV3-25P01717 112 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 ALDH2P05091 517 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 ATF2P15336 505 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 TFE3P19532 575 aaPredicted RBP8.39□□□□□ -1.07
SFPQ-202ENST00000460428 FGFR3P22607 806 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 RDXP35241 583 aaKnown RBP8.39□□□□□ -1.07
SFPQ-202ENST00000460428 RFC2P35250 354 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 GJC1P36383 396 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 MAGEA11P43364 429 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 NDUFV1P49821 464 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 PMS2P54278 862 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 CACNA2D1P54289 1103 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 ATP11AP98196 1134 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 TSPY1Q01534 308 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 SMARCB1Q12824 385 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 ELAVL2Q12926 359 aaKnown RBP8.39□□□□□ -1.07
SFPQ-202ENST00000460428 MORF4L2Q15014 288 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 LLGL1Q15334 1064 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 NFE2Q16621 373 aaPredicted RBP8.39□□□□□ -1.07
SFPQ-202ENST00000460428 RAB6CQ53S08 254 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 ZFYVE27Q5T4F4 411 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 VSTM1Q6UX27 236 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 ZNF365Q70YC5 407 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 PCGF5Q86SE9 256 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 NPAS4Q8IUM7 802 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 DCP1BQ8IZD4 617 aaKnown RBP8.39□□□□□ -1.07
SFPQ-202ENST00000460428 PLD5Q8N7P1 536 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 PCDH19Q8TAB3 1148 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 HSPH1Q92598 858 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 ARMC5Q96C12 935 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 ACSF2Q96CM8 615 aaPredicted RBP8.39□□□□□ -1.07
SFPQ-202ENST00000460428 C8orf48Q96LL4 319 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 KCNK16Q96T55 309 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 MED10Q9BTT4 135 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 COLEC11Q9BWP8 271 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 MAK16Q9BXY0 300 aaKnown RBP8.39□□□□□ -1.07
SFPQ-202ENST00000460428 ULBP1Q9BZM6 244 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 TRIM31Q9BZY9 425 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 RAB6CQ9H0N0 254 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 RNF208Q9H0X6 261 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 ADAM7Q9H2U9 754 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 TMBIM4Q9HC24 238 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 TMLHEQ9NVH6 421 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 COMMD8Q9NX08 183 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 CALCOCO1Q9P1Z2 691 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 TBX21Q9UL17 535 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 TPX2Q9ULW0 747 aaKnown RBP8.39□□□□□ -1.07
SFPQ-202ENST00000460428 FZD10Q9ULW2 581 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 ZNF148Q9UQR1 794 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 INPP5FQ9Y2H2 1132 aa8.39□□□□□ -1.07
SFPQ-202ENST00000460428 FAM92AA1XBS5 289 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 OR6C75A6NL08 312 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 YJEFN3A6XGL0 299 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 DCDC2CA8MYV0 355 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 E7ENQ6 273 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 MCF2LO15068 1137 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 RNF40O75150 1001 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 TCEA3O75764 348 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 F9P00740 461 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 LTFP02788 710 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 RBP3P10745 1247 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 ADCY8P40145 1251 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 MAGEA6P43360 314 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 SULT1E1P49888 294 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 ITGA8P53708 1063 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 SEMA3BQ13214 749 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 TERF2Q15554 542 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 CA9Q16790 459 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 CDO1Q16878 200 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 TCTN1Q2MV58 587 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 DCAF6Q58WW2 860 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 ZC3H12AQ5D1E8 599 aaKnown RBP8.38□□□□□ -1.07
SFPQ-202ENST00000460428 TNFAIP8L3Q5GJ75 292 aa8.38□□□□□ -1.07
SFPQ-202ENST00000460428 RNASEH2BQ5TBB1 312 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms