RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 NMUR1Q9HB89 426 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 ARHGEF4Q9NR80 690 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 SPHK2Q9NRA0 654 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.24□□□□□ -0.617e-9■□□□□ 9.8
DDX39A-203ENST00000454233 OSER1Q9NX31 292 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 CLIC5Q9NZA1 410 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 KIAA1468Q9P260 1216 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 TSPAN16Q9UKR8 245 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 PCDHB4Q9Y5E5 795 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.24□□□□□ -0.61
DDX39A-203ENST00000454233 USP3Q9Y6I4 520 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 GPR179Q6PRD1 2367 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 XPO1O14980 1071 aaKnown RBP11.23□□□□□ -0.61
DDX39A-203ENST00000454233 MDM4O15151 490 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 HOXC11O43248 304 aaPredicted RBP11.23□□□□□ -0.61
DDX39A-203ENST00000454233 KAT7O95251 611 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 APBB3O95704 486 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 AFPP02771 609 aaKnown RBP11.23□□□□□ -0.61
DDX39A-203ENST00000454233 PAEPP09466 180 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 GRIA2P42262 883 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 ID4P47928 161 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 SLC6A11P48066 632 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 PXNP49023 591 aaPredicted RBP11.23□□□□□ -0.61
DDX39A-203ENST00000454233 MARSP56192 900 aaKnown RBP11.23□□□□□ -0.61
DDX39A-203ENST00000454233 MRPS21P82921 87 aaKnown RBP11.23□□□□□ -0.61
DDX39A-203ENST00000454233 KDSRQ06136 332 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 PDE4CQ08493 712 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 BST2Q10589 180 aaKnown RBP11.23□□□□□ -0.61
DDX39A-203ENST00000454233 KCNH2Q12809 1159 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 SRSF5Q13243 272 aaKnown RBP11.23□□□□□ -0.61
DDX39A-203ENST00000454233 ANO4Q32M45 955 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 C2orf27AQ580R0 203 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 TMEM270Q6UE05 265 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 RSRC2Q7L4I2 434 aaKnown RBP11.23□□□□□ -0.61
DDX39A-203ENST00000454233 SCD5Q86SK9 330 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 TTC30AQ86WT1 665 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 MIB1Q86YT6 1006 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 TRIM59Q8IWR1 403 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 ZNF276Q8N554 614 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 USP33Q8TEY7 942 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 HHIPQ96QV1 700 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 LRRC4Q9HBW1 653 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 RASAL2Q9UJF2 1139 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 NUDT5Q9UKK9 219 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 STRIP2Q9ULQ0 834 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 USP18Q9UMW8 372 aa11.23□□□□□ -0.61
DDX39A-203ENST00000454233 K7EQS6 105 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 AXIN1O15169 862 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 RPP40O75818 363 aaKnown RBP11.22□□□□□ -0.61
DDX39A-203ENST00000454233 ZBED1O96006 694 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 RETP07949 1114 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 SETSIPP0DME0 302 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 HOXC13P31276 330 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 TNFRSF4P43489 277 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 TKTL1P51854 596 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 YWHAGP61981 247 aaKnown RBP eCLIP11.22□□□□□ -0.61
DDX39A-203ENST00000454233 COG7P83436 770 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 STILQ15468 1287 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 HSF5Q4G112 596 aaPredicted RBP11.22□□□□□ -0.61
DDX39A-203ENST00000454233 RAB41Q5JT25 222 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 C12orf40Q86WS4 652 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 TMEM25Q86YD3 366 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 CREBRFQ8IUR6 639 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 SIX6OS1Q8N1H7 587 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 UBR7Q8N806 425 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 NAT16Q8N8M0 369 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 EHBP1Q8NDI1 1231 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 TSTD1Q8NFU3 115 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 GAB3Q8WWW8 586 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 WBP2Q969T9 261 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 IPO9Q96P70 1041 aaKnown RBP11.22□□□□□ -0.61
DDX39A-203ENST00000454233 XPO6Q96QU8 1125 aaKnown RBP11.22□□□□□ -0.61
DDX39A-203ENST00000454233 ULBP1Q9BZM6 244 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 DCLK3Q9C098 648 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 POLR3BQ9NW08 1133 aaPredicted RBP11.22□□□□□ -0.61
DDX39A-203ENST00000454233 WDR35Q9P2L0 1181 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 DEC1Q9P2X7 70 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 RWDD2AQ9UIY3 292 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 MMP17Q9ULZ9 603 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 ZNF510Q9Y2H8 683 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 VPS13AQ96RL7 3174 aa11.22□□□□□ -0.61
DDX39A-203ENST00000454233 MYOFQ9NZM1 2061 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 USP34Q70CQ2 3546 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 A0A0A0MRY4 1105 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 TBC1D3BA6NDS4 549 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 NEDD8-MDP1E9PL57 170 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 O00370 1275 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 LRP3O75074 770 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 TULP3O75386 442 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 STC2O76061 302 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 TIE1P35590 1138 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 DGKEP52429 567 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 GCNT1Q02742 428 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 EFEMP1Q12805 493 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 TPD52L1Q16890 204 aaPredicted RBP11.21□□□□□ -0.61
DDX39A-203ENST00000454233 PM20D1Q6GTS8 502 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 LCLAT1Q6UWP7 414 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 TPGS1Q6ZTW0 290 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 RRAGAQ7L523 313 aa11.21□□□□□ -0.61
DDX39A-203ENST00000454233 CACNA2D4Q7Z3S7 1137 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms