RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 SSX2IPQ9Y2D8 614 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 KCNK1O00180 336 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 GNGT2O14610 69 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 MAP3K13O43283 966 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 EPHA3P29320 983 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 EMC2Q15006 297 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 NFIL3Q16649 462 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 PPM1JQ5JR12 505 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 TDRD10Q5VZ19 366 aaKnown RBP12.82□□□□□ -0.36
UBE3B-204ENST00000449510 RWDD4Q6NW29 188 aaKnown RBP12.82□□□□□ -0.36
UBE3B-204ENST00000449510 TTC33Q6PID6 262 aaPredicted RBP12.82□□□□□ -0.36
UBE3B-204ENST00000449510 CMC1Q7Z7K0 106 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 EXOC8Q8IYI6 725 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 DAW1Q8N136 415 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 PIWIL2Q8TC59 973 aaKnown RBP12.82□□□□□ -0.36
UBE3B-204ENST00000449510 RXFP2Q8WXD0 754 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 HAUS8Q9BT25 410 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 RABGEF1Q9UJ41 708 aa12.82□□□□□ -0.36
UBE3B-204ENST00000449510 KPNA7A9QM74 516 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 GMPRP36959 345 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 PLK1P53350 603 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 AFAP1L2Q8N4X5 818 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 MPHOSPH6Q99547 160 aaKnown RBP12.81□□□□□ -0.36
UBE3B-204ENST00000449510 TXLNGYQ9BZA5 131 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 SIK2Q9H0K1 926 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 MMADHCQ9H3L0 296 aaPredicted RBP12.81□□□□□ -0.36
UBE3B-204ENST00000449510 RSAD1Q9HA92 442 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 ZNF302Q9NR11 478 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 BFARQ9NZS9 450 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 HMGCRP04035 888 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 CPA3P15088 417 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 NOMO3P69849 1222 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 SPIRE1Q08AE8 756 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 PLEKHA7Q6IQ23 1121 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 TREML1Q86YW5 311 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 UNC5BQ8IZJ1 945 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 PSPC1Q8WXF1 523 aaKnown RBP12.81□□□□□ -0.36
UBE3B-204ENST00000449510 SPATA16Q9BXB7 569 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 KRT82Q9NSB4 513 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 LNPEPQ9UIQ6 1025 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 SNX9Q9Y5X1 595 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 SORBS2O94875 1100 aaKnown RBP12.81□□□□□ -0.36
UBE3B-204ENST00000449510 TMEM63AO94886 807 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 ASNSP08243 561 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 FAM58BPP0C7Q3 252 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 TSPY1Q01534 308 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 CCDC15Q0P6D6 951 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 NEDD8Q15843 81 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 PODNQ7Z5L7 613 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 BHLHE22Q8NFJ8 381 aaPredicted RBP12.81□□□□□ -0.36
UBE3B-204ENST00000449510 MKL1Q969V6 931 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 MOCOSQ96EN8 888 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 WRNIP1Q96S55 665 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 THAP1Q9NVV9 213 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 TJP2Q9UDY2 1190 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 RGPD2P0DJD1 1756 aa12.81□□□□□ -0.36
UBE3B-204ENST00000449510 CYP3A7-CYP3A51PA0A087WV96 503 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 CYP3A7P24462 503 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 STIP1P31948 543 aaKnown RBP12.8□□□□□ -0.36
UBE3B-204ENST00000449510 CLK2P49760 499 aaKnown RBP12.8□□□□□ -0.36
UBE3B-204ENST00000449510 DENND1BQ6P3S1 775 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 TRMT10BQ6PF06 316 aaKnown RBP12.8□□□□□ -0.36
UBE3B-204ENST00000449510 FAM131BQ86XD5 332 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 SCUBE3Q8IX30 993 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 NRG4Q8WWG1 115 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 LENG9Q96B70 501 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 GPR88Q9GZN0 384 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 NIF3L1Q9GZT8 377 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 KCNK4Q9NYG8 393 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 RBMX2Q9Y388 322 aaKnown RBP12.8□□□□□ -0.36
UBE3B-204ENST00000449510 hCG_1818297A0A087WSY0 165 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 A6NHS1 94 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 PRPF4O43172 522 aaKnown RBP eCLIP12.8□□□□□ -0.36
UBE3B-204ENST00000449510 FOXD2O60548 495 aaPredicted RBP12.8□□□□□ -0.36
UBE3B-204ENST00000449510 TM7SF2O76062 418 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 ALADP13716 330 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 SERPINB8P50452 374 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 PDAP1Q13442 181 aaKnown RBP12.8□□□□□ -0.36
UBE3B-204ENST00000449510 B3GNT6Q6ZMB0 384 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 BNC2Q6ZN30 1099 aaPredicted RBP12.8□□□□□ -0.36
UBE3B-204ENST00000449510 TMEM161BQ8NDZ6 487 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 NAT14Q8WUY8 206 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 FAM49AQ9H0Q0 323 aaPredicted RBP12.8□□□□□ -0.36
UBE3B-204ENST00000449510 ARHGEF38Q9NXL2 777 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 ATXN10Q9UBB4 475 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 CNTNAP2Q9UHC6 1331 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 C1orf232A0A0U1RR37 186 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 PARNO95453 639 aaKnown RBP12.8□□□□□ -0.36
UBE3B-204ENST00000449510 CST3P01034 146 aaPredicted RBP12.8□□□□□ -0.36
UBE3B-204ENST00000449510 ITGB3P05106 788 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 CDK7P50613 346 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 CSE1LP55060 971 aaKnown RBP12.8□□□□□ -0.36
UBE3B-204ENST00000449510 GCNT1Q02742 428 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 ZBTB49Q6ZSB9 765 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 ZNF677Q86XU0 584 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 PANX3Q96QZ0 392 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 TCF7L2Q9NQB0 619 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 CCDC167Q9P0B6 97 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 LGALS13Q9UHV8 139 aa12.8□□□□□ -0.36
UBE3B-204ENST00000449510 AP4B1Q9Y6B7 739 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms