RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 HINFPQ9BQA5 517 aa19.91■□□□□ 0.78
HMGB3P22-201ENST00000442010 SRRTQ9BXP5 876 aaKnown RBP19.91■□□□□ 0.78
HMGB3P22-201ENST00000442010 NACA2Q9H009 215 aa19.91■□□□□ 0.78
HMGB3P22-201ENST00000442010 CLIC5Q9NZA1 410 aa19.91■□□□□ 0.78
HMGB3P22-201ENST00000442010 NCDNQ9UBB6 729 aa19.91■□□□□ 0.78
HMGB3P22-201ENST00000442010 TSPAN16Q9UKR8 245 aa19.91■□□□□ 0.78
HMGB3P22-201ENST00000442010 SLC8A2Q9UPR5 921 aa19.91■□□□□ 0.78
HMGB3P22-201ENST00000442010 ABCA7Q8IZY2 2146 aa19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 MDM4O15151 490 aa19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 HOXC11O43248 304 aaPredicted RBP19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 GNA14O95837 355 aa19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 IRF1P10914 325 aa19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 GAD2Q05329 585 aa19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 PDE4CQ08493 712 aa19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 KCNH2Q12809 1159 aa19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 SIM2Q14190 667 aaPredicted RBP19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 CAMK4Q16566 473 aa19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 GOLGA7BQ2TAP0 167 aa19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 PKDCCQ504Y2 493 aa19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 SGO2Q562F6 1265 aa19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 CCDC26Q8TAB7 109 aa19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 KAT5Q92993 513 aa19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 NT5C1BQ96P26 610 aa19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 PNKPQ96T60 521 aa19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 SPHK2Q9NRA0 654 aa19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 DNMT3LQ9UJW3 386 aa19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 NAGPAQ9UK23 515 aa19.9■□□□□ 0.78
HMGB3P22-201ENST00000442010 RNF225M0QZC1 329 aaPredicted RBP19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 O00370 1275 aa19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 XPO1O14980 1071 aaKnown RBP19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 KAT7O95251 611 aa19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 VDRP11473 427 aa19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 PLA2G4AP47712 749 aa19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 PXNP49023 591 aaPredicted RBP19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 DMC1Q14565 340 aa19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 LPAL2Q16609 132 aa19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 PM20D1Q6GTS8 502 aa19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 LAIR1Q6GTX8 287 aa19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 Q6ZNB5 142 aa19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 BHLHA9Q7RTU4 235 aa19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 TMEM25Q86YD3 366 aa19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 EHBP1Q8NDI1 1231 aa19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 TFAP2BQ92481 460 aa19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 ACDQ96AP0 544 aa19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 HHIPQ96QV1 700 aa19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 ZSWIM1Q9BR11 485 aa19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 KIAA1257Q9ULG3 409 aa19.89■□□□□ 0.77
HMGB3P22-201ENST00000442010 PAEPP09466 180 aa19.88■□□□□ 0.77
HMGB3P22-201ENST00000442010 RALAP11233 206 aa19.88■□□□□ 0.77
HMGB3P22-201ENST00000442010 BCAT1P54687 386 aa19.88■□□□□ 0.77
HMGB3P22-201ENST00000442010 MRPS21P82921 87 aaKnown RBP19.88■□□□□ 0.77
HMGB3P22-201ENST00000442010 C10orf120Q5SQS8 335 aa19.88■□□□□ 0.77
HMGB3P22-201ENST00000442010 TMEM270Q6UE05 265 aa19.88■□□□□ 0.77
HMGB3P22-201ENST00000442010 PRR23BQ6ZRT6 265 aa19.88■□□□□ 0.77
HMGB3P22-201ENST00000442010 ARHGEF19Q8IW93 802 aa19.88■□□□□ 0.77
HMGB3P22-201ENST00000442010 GAB3Q8WWW8 586 aa19.88■□□□□ 0.77
HMGB3P22-201ENST00000442010 EBF1Q9UH73 591 aa19.88■□□□□ 0.77
HMGB3P22-201ENST00000442010 RWDD2AQ9UIY3 292 aa19.88■□□□□ 0.77
HMGB3P22-201ENST00000442010 NUP205Q92621 2012 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 PLXND1Q9Y4D7 1925 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 TULP3O75386 442 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 STC2O76061 302 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 APODP05090 189 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 CD19P15391 556 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 GRIA2P42262 883 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 KIR2DL1P43626 348 aaPredicted RBP19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 TKTL1P51854 596 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 SEC13P55735 322 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 SLC8A3P57103 927 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 GCNT1Q02742 428 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 GOLGA8FQ08AF8 430 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 GOLGA8DPQ0D2H9 430 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 BST2Q10589 180 aaKnown RBP19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 CETN1Q12798 172 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 C2orf27AQ580R0 203 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 LCLAT1Q6UWP7 414 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 TADA2BQ86TJ2 420 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 PPM1KQ8N3J5 372 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 UBA3Q8TBC4 463 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 SECISBP2LQ93073 1101 aaKnown RBP19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 CDK5RAP1Q96SZ6 601 aaKnown RBP19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 PARD6AQ9NPB6 346 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 ARHGEF4Q9NR80 690 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 MARK1Q9P0L2 795 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 GMEB2Q9UKD1 530 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 RAB23Q9ULC3 237 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 MMP17Q9ULZ9 603 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 PCDHB4Q9Y5E5 795 aa19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.87■□□□□ 0.77
HMGB3P22-201ENST00000442010 THADAQ6YHU6 1953 aa19.86■□□□□ 0.77
HMGB3P22-201ENST00000442010 ZBED1O96006 694 aa19.86■□□□□ 0.77
HMGB3P22-201ENST00000442010 AFPP02771 609 aaKnown RBP19.86■□□□□ 0.77
HMGB3P22-201ENST00000442010 KLKB1P03952 638 aa19.86■□□□□ 0.77
HMGB3P22-201ENST00000442010 RETP07949 1114 aa19.86■□□□□ 0.77
HMGB3P22-201ENST00000442010 TNFRSF4P43489 277 aa19.86■□□□□ 0.77
HMGB3P22-201ENST00000442010 ZNF132P52740 706 aa19.86■□□□□ 0.77
HMGB3P22-201ENST00000442010 RRAGAQ7L523 313 aa19.86■□□□□ 0.77
HMGB3P22-201ENST00000442010 ARHGAP18Q8N392 663 aa19.86■□□□□ 0.77
HMGB3P22-201ENST00000442010 GPR161Q8N6U8 529 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms