RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 TJP2Q9UDY2 1190 aa21.61■■□□□ 1.05
PMS1-211ENST00000424766 DPYSL4O14531 572 aa21.6■■□□□ 1.05
PMS1-211ENST00000424766 CKMP06732 381 aa21.6■■□□□ 1.05
PMS1-211ENST00000424766 GLI1P08151 1106 aa21.6■■□□□ 1.05
PMS1-211ENST00000424766 GZMAP12544 262 aa21.6■■□□□ 1.05
PMS1-211ENST00000424766 TCF3P15923 654 aa21.6■■□□□ 1.05
PMS1-211ENST00000424766 SCNN1AP37088 669 aa21.6■■□□□ 1.05
PMS1-211ENST00000424766 NSFP46459 744 aaKnown RBP21.6■■□□□ 1.05
PMS1-211ENST00000424766 OR6B2Q6IFH4 312 aa21.6■■□□□ 1.05
PMS1-211ENST00000424766 ACAD10Q6JQN1 1059 aa21.6■■□□□ 1.05
PMS1-211ENST00000424766 WDR59Q6PJI9 974 aa21.6■■□□□ 1.05
PMS1-211ENST00000424766 BEND5Q7L4P6 421 aa21.6■■□□□ 1.05
PMS1-211ENST00000424766 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.6■■□□□ 1.05
PMS1-211ENST00000424766 VPS36Q86VN1 386 aa21.6■■□□□ 1.05
PMS1-211ENST00000424766 SLC30A5Q8TAD4 765 aa21.6■■□□□ 1.05
PMS1-211ENST00000424766 USP13Q92995 863 aaPredicted RBP21.6■■□□□ 1.05
PMS1-211ENST00000424766 UHRF1Q96T88 793 aaPredicted RBP21.6■■□□□ 1.05
PMS1-211ENST00000424766 TRIM62Q9BVG3 475 aa21.6■■□□□ 1.05
PMS1-211ENST00000424766 CD320Q9NPF0 282 aa21.6■■□□□ 1.05
PMS1-211ENST00000424766 OLA1Q9NTK5 396 aaKnown RBP21.6■■□□□ 1.05
PMS1-211ENST00000424766 ABHD10Q9NUJ1 306 aa21.6■■□□□ 1.05
PMS1-211ENST00000424766 ASNSD1Q9NWL6 643 aa21.6■■□□□ 1.05
PMS1-211ENST00000424766 DNMT3LQ9UJW3 386 aa21.6■■□□□ 1.05
PMS1-211ENST00000424766 ARHGAP26Q9UNA1 814 aa21.6■■□□□ 1.05
PMS1-211ENST00000424766 NUMBLQ9Y6R0 609 aa21.6■■□□□ 1.05
PMS1-211ENST00000424766 DDX3XO00571 662 aaKnown RBP eCLIP21.59■■□□□ 1.057e-11■■■□□ 18.9
PMS1-211ENST00000424766 VIPR2P41587 438 aa21.59■■□□□ 1.05
PMS1-211ENST00000424766 YWHAZP63104 245 aaKnown RBP21.59■■□□□ 1.05
PMS1-211ENST00000424766 SLC6A3Q01959 620 aa21.59■■□□□ 1.05
PMS1-211ENST00000424766 C10orf120Q5SQS8 335 aa21.59■■□□□ 1.05
PMS1-211ENST00000424766 HFE2Q6ZVN8 426 aa21.59■■□□□ 1.05
PMS1-211ENST00000424766 FAM183BPQ6ZVS7 135 aa21.59■■□□□ 1.05
PMS1-211ENST00000424766 RNF135Q8IUD6 432 aa21.59■■□□□ 1.05
PMS1-211ENST00000424766 SLC44A3Q8N4M1 653 aa21.59■■□□□ 1.05
PMS1-211ENST00000424766 TC2NQ8N9U0 490 aa21.59■■□□□ 1.05
PMS1-211ENST00000424766 NECAB3Q96P71 396 aaPredicted RBP21.59■■□□□ 1.05
PMS1-211ENST00000424766 NACA2Q9H009 215 aa21.59■■□□□ 1.05
PMS1-211ENST00000424766 GRPEL1Q9HAV7 217 aa21.59■■□□□ 1.05
PMS1-211ENST00000424766 ARHGAP20Q9P2F6 1191 aa21.59■■□□□ 1.05
PMS1-211ENST00000424766 HEPACAM2A8MVW5 462 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 PRAMEF12O95522 483 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 TBX18O95935 607 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 MBL2P11226 248 aaPredicted RBP21.58■■□□□ 1.05
PMS1-211ENST00000424766 CDK17Q00537 523 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 GOLGA8FQ08AF8 430 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 GOLGA8DPQ0D2H9 430 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 OLFML1Q6UWY5 402 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 TOGARAM2Q6ZUX3 1019 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 DDX42Q86XP3 938 aaKnown RBP eCLIP21.58■■□□□ 1.05
PMS1-211ENST00000424766 XYLT1Q86Y38 959 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 MFSD6LQ8IWD5 586 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 RNF139Q8WU17 664 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 RSAD2Q8WXG1 361 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 FAM149B1Q96BN6 582 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 VCPIP1Q96JH7 1222 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 KXD1Q9BQD3 176 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 RPP25Q9BUL9 199 aaKnown RBP21.58■■□□□ 1.05
PMS1-211ENST00000424766 PLA2G2FQ9BZM2 168 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 SMG9Q9H0W8 520 aaKnown RBP21.58■■□□□ 1.05
PMS1-211ENST00000424766 ADAM22Q9P0K1 906 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 WDR35Q9P2L0 1181 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 IMPACTQ9P2X3 320 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 ADAMTS1Q9UHI8 967 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 STRIP2Q9ULQ0 834 aa21.58■■□□□ 1.05
PMS1-211ENST00000424766 SSU72P8A0A1W2PR75 194 aa21.57■■□□□ 1.04
PMS1-211ENST00000424766 CALB1P05937 261 aa21.57■■□□□ 1.04
PMS1-211ENST00000424766 ASGR2P07307 311 aa21.57■■□□□ 1.04
PMS1-211ENST00000424766 PLEKP08567 350 aaPredicted RBP21.57■■□□□ 1.04
PMS1-211ENST00000424766 C1QBPQ07021 282 aaKnown RBP21.57■■□□□ 1.04
PMS1-211ENST00000424766 PTP4A2Q12974 167 aa21.57■■□□□ 1.04
PMS1-211ENST00000424766 MAPK8IP2Q13387 824 aaPredicted RBP21.57■■□□□ 1.04
PMS1-211ENST00000424766 TDGQ13569 410 aa21.57■■□□□ 1.04
PMS1-211ENST00000424766 MSANTD2Q6P1R3 559 aa21.57■■□□□ 1.04
PMS1-211ENST00000424766 MMS22LQ6ZRQ5 1243 aa21.57■■□□□ 1.04
PMS1-211ENST00000424766 RSRC2Q7L4I2 434 aaKnown RBP21.57■■□□□ 1.04
PMS1-211ENST00000424766 SLC26A9Q7LBE3 791 aa21.57■■□□□ 1.04
PMS1-211ENST00000424766 KIAA1958Q8N8K9 716 aa21.57■■□□□ 1.04
PMS1-211ENST00000424766 DEPDC1BQ8WUY9 529 aa21.57■■□□□ 1.04
PMS1-211ENST00000424766 EDEM1Q92611 657 aa21.57■■□□□ 1.04
PMS1-211ENST00000424766 KHSRPQ92945 711 aaKnown RBP eCLIP21.57■■□□□ 1.048e-10■■□□□ 12.3
PMS1-211ENST00000424766 RSPRY1Q96DX4 576 aa21.57■■□□□ 1.04
PMS1-211ENST00000424766 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.57■■□□□ 1.04
PMS1-211ENST00000424766 KLF16Q9BXK1 252 aaPredicted RBP21.57■■□□□ 1.04
PMS1-211ENST00000424766 POPDC2Q9HBU9 364 aa21.57■■□□□ 1.04
PMS1-211ENST00000424766 NUDT5Q9UKK9 219 aa21.57■■□□□ 1.04
PMS1-211ENST00000424766 CCL26Q9Y258 94 aa21.57■■□□□ 1.04
PMS1-211ENST00000424766 HSF2BPO75031 334 aa21.56■■□□□ 1.04
PMS1-211ENST00000424766 RTN2O75298 545 aa21.56■■□□□ 1.04
PMS1-211ENST00000424766 FYNP06241 537 aa21.56■■□□□ 1.04
PMS1-211ENST00000424766 PSMC3P17980 439 aa21.56■■□□□ 1.04
PMS1-211ENST00000424766 EIF4A3P38919 411 aaKnown RBP21.56■■□□□ 1.04
PMS1-211ENST00000424766 GSCP56915 257 aaPredicted RBP21.56■■□□□ 1.04
PMS1-211ENST00000424766 VITQ6UXI7 678 aa21.56■■□□□ 1.04
PMS1-211ENST00000424766 MON1BQ7L1V2 547 aa21.56■■□□□ 1.04
PMS1-211ENST00000424766 MCOLN2Q8IZK6 566 aa21.56■■□□□ 1.04
PMS1-211ENST00000424766 ST13P5Q8NFI4 369 aaPredicted RBP21.56■■□□□ 1.04
PMS1-211ENST00000424766 BPIFB1Q8TDL5 484 aa21.56■■□□□ 1.04
PMS1-211ENST00000424766 SH3RF2Q8TEC5 729 aa21.56■■□□□ 1.04
PMS1-211ENST00000424766 LRRC3BQ96PB8 259 aa21.56■■□□□ 1.04
PMS1-211ENST00000424766 C11orf70Q9BRQ4 267 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms