RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 C20orf96Q9NUD7 363 aaPredicted RBP17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 DEC1Q9P2X7 70 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 LIMA1Q9UHB6 759 aaKnown RBP17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 MRFAP1Q9Y605 127 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 TBC1D3DA0A087WVF3 549 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 TBC1D3IA0A087WXS9 549 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 TBC1D3EA0A087X179 549 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 TBC1D3KA0A087X1G2 549 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 TBC1D3FA6NER0 549 aaPredicted RBP17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 TBC1D3LB9A6J9 549 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 MICAL2O94851 1124 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 TBC1D3HP0C7X1 549 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 SNRPD1P62314 119 aaKnown RBP17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 ZNF618Q5T7W0 954 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 TBC1D3GQ6DHY5 549 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 TBC1D3CQ6IPX1 549 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 TBC1D3Q8IZP1 549 aaPredicted RBP17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 KREMEN2Q8NCW0 462 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 C1orf54Q8WWF1 131 aa17.53■□□□□ 0.4
SYNGAP1-202ENST00000418600 PDE2AO00408 941 aaPredicted RBP17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 CFLARO15519 480 aa17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 ALPPL2P10696 532 aa17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 SERPINA4P29622 427 aa17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 USP45Q70EL2 814 aa17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 RAD18Q9NS91 495 aa17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 USP20Q9Y2K6 914 aa17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 A0A1W2PQC6 194 aa17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 SOWAHBA6NEL2 793 aa17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 SCAMP3O14828 347 aaKnown RBP17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 DHX9Q08211 1270 aaKnown RBP17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 SPDYAQ5MJ70 313 aa17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 MCOLN3Q8TDD5 553 aa17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 IL23AQ9NPF7 189 aa17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 FRMPD4Q14CM0 1322 aa17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 CCDC188H7C350 402 aa17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 SRP72O76094 671 aaKnown RBP17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 RPN2P04844 631 aa17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 ELOA2Q8IYF1 753 aaPredicted RBP17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 ZBTB45Q96K62 511 aaPredicted RBP17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 BPIFA3Q9BQP9 254 aa17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 INTS9Q9NV88 658 aaKnown RBP17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 TRMT6Q9UJA5 497 aaKnown RBP17.52■□□□□ 0.4
SYNGAP1-202ENST00000418600 SNF8Q96H20 258 aa17.52■□□□□ 0.39
SYNGAP1-202ENST00000418600 VPS50Q96JG6 964 aa17.52■□□□□ 0.39
SYNGAP1-202ENST00000418600 ACO2Q99798 780 aaKnown RBP17.52■□□□□ 0.39
SYNGAP1-202ENST00000418600 TNNI3P19429 210 aa17.52■□□□□ 0.39
SYNGAP1-202ENST00000418600 SLC9A1P19634 815 aa17.52■□□□□ 0.39
SYNGAP1-202ENST00000418600 PTENP60484 403 aa17.52■□□□□ 0.39
SYNGAP1-202ENST00000418600 XRCC4Q13426 336 aa17.52■□□□□ 0.39
SYNGAP1-202ENST00000418600 TMC5Q6UXY8 1006 aa17.52■□□□□ 0.39
SYNGAP1-202ENST00000418600 METTL16Q86W50 562 aaKnown RBP17.52■□□□□ 0.39
SYNGAP1-202ENST00000418600 SLC35G2Q8TBE7 412 aa17.52■□□□□ 0.39
SYNGAP1-202ENST00000418600 PXYLP1Q8TE99 480 aa17.52■□□□□ 0.39
SYNGAP1-202ENST00000418600 TEKT2Q9UIF3 430 aa17.52■□□□□ 0.39
SYNGAP1-202ENST00000418600 AP4E1Q9UPM8 1137 aa17.52■□□□□ 0.39
SYNGAP1-202ENST00000418600 TDRKHQ9Y2W6 561 aaKnown RBP17.52■□□□□ 0.39
SYNGAP1-202ENST00000418600 HCN4Q9Y3Q4 1203 aa17.52■□□□□ 0.39
SYNGAP1-202ENST00000418600 BRCC3P46736 316 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 CAPSQ13938 189 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 NPLOC4Q8TAT6 608 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 SERPINI1Q99574 410 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 DDR2Q16832 855 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 SHROOM1Q2M3G4 852 aaPredicted RBP17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 FBXW10Q5XX13 1052 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 ACAD10Q6JQN1 1059 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 MTSS1LQ765P7 747 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 FAM131BQ86XD5 332 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 TRIM59Q8IWR1 403 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 PPWD1Q96BP3 646 aaKnown RBP17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 FAR2Q96K12 515 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 UBA2Q9UBT2 640 aaPredicted RBP17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 APPL1Q9UKG1 709 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 ATG13O75143 517 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 LSM8O95777 96 aaKnown RBP17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 APRTP07741 180 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 SMAD3P84022 425 aaKnown RBP17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 PDCLQ13371 301 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 HSDL1Q3SXM5 330 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 GTF2IRD1Q9UHL9 959 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 KRT20P35900 424 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 ESRRGP62508 458 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 PDK2Q15119 407 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 POM121L1PQ3SYA9 428 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 ZBED8Q8IZ13 594 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 CLPBQ9H078 707 aa17.51■□□□□ 0.39
SYNGAP1-202ENST00000418600 ACSL3O95573 720 aa17.5■□□□□ 0.39
SYNGAP1-202ENST00000418600 OCM2P0CE71 109 aa17.5■□□□□ 0.39
SYNGAP1-202ENST00000418600 OCMP0CE72 109 aaPredicted RBP17.5■□□□□ 0.39
SYNGAP1-202ENST00000418600 NCF2P19878 526 aaPredicted RBP17.5■□□□□ 0.39
SYNGAP1-202ENST00000418600 DUSP4Q13115 394 aa17.5■□□□□ 0.39
SYNGAP1-202ENST00000418600 TP53BP2Q13625 1128 aa17.5■□□□□ 0.39
SYNGAP1-202ENST00000418600 C4orf22Q6V702 233 aa17.5■□□□□ 0.39
SYNGAP1-202ENST00000418600 PRPF39Q86UA1 669 aaKnown RBP17.5■□□□□ 0.39
SYNGAP1-202ENST00000418600 SPPL2BQ8TCT7 592 aa17.5■□□□□ 0.39
SYNGAP1-202ENST00000418600 PACSIN2Q9UNF0 486 aaPredicted RBP17.5■□□□□ 0.39
SYNGAP1-202ENST00000418600 CASZ1Q86V15 1759 aa17.5■□□□□ 0.39
SYNGAP1-202ENST00000418600 PRMT3O60678 531 aa17.5■□□□□ 0.39
SYNGAP1-202ENST00000418600 FDPSP14324 419 aaKnown RBP17.5■□□□□ 0.39
SYNGAP1-202ENST00000418600 ARHGDIAP52565 204 aa17.5■□□□□ 0.39
SYNGAP1-202ENST00000418600 CCDC138Q96M89 665 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms