RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 PLCD1P51178 756 aa6.3□□□□□ -1.4
ATG4C-204ENST00000414558 CFHR3Q02985 330 aa6.3□□□□□ -1.4
ATG4C-204ENST00000414558 GALEQ14376 348 aa6.3□□□□□ -1.4
ATG4C-204ENST00000414558 KCNB1Q14721 858 aa6.3□□□□□ -1.4
ATG4C-204ENST00000414558 KCNAB1Q14722 419 aa6.3□□□□□ -1.4
ATG4C-204ENST00000414558 CLCA4Q14CN2 919 aa6.3□□□□□ -1.4
ATG4C-204ENST00000414558 PXDC1Q5TGL8 231 aa6.3□□□□□ -1.4
ATG4C-204ENST00000414558 USP49Q70CQ1 688 aa6.3□□□□□ -1.4
ATG4C-204ENST00000414558 RNF44Q7L0R7 432 aa6.3□□□□□ -1.4
ATG4C-204ENST00000414558 KRT78Q8N1N4 520 aa6.3□□□□□ -1.4
ATG4C-204ENST00000414558 PNPLA1Q8N8W4 532 aa6.3□□□□□ -1.4
ATG4C-204ENST00000414558 OSR1Q8TAX0 266 aaPredicted RBP6.3□□□□□ -1.4
ATG4C-204ENST00000414558 PNISRQ8TF01 805 aaKnown RBP6.3□□□□□ -1.4
ATG4C-204ENST00000414558 PNPLA8Q9NP80 782 aa6.3□□□□□ -1.4
ATG4C-204ENST00000414558 SNX13Q9Y5W8 968 aa6.3□□□□□ -1.4
ATG4C-204ENST00000414558 BMP15O95972 392 aa6.29□□□□□ -1.4
ATG4C-204ENST00000414558 ADRA1DP25100 572 aa6.29□□□□□ -1.4
ATG4C-204ENST00000414558 MCM5P33992 734 aa6.29□□□□□ -1.4
ATG4C-204ENST00000414558 EIF4A1P60842 406 aaKnown RBP6.29□□□□□ -1.4
ATG4C-204ENST00000414558 MANEALQ5VSG8 457 aa6.29□□□□□ -1.4
ATG4C-204ENST00000414558 CLEC9AQ6UXN8 241 aa6.29□□□□□ -1.4
ATG4C-204ENST00000414558 METTL25Q8N6Q8 603 aa6.29□□□□□ -1.4
ATG4C-204ENST00000414558 C12orf76Q8N812 135 aaPredicted RBP6.29□□□□□ -1.4
ATG4C-204ENST00000414558 C11orf44Q8N8P7 122 aa6.29□□□□□ -1.4
ATG4C-204ENST00000414558 Q8N9P0 234 aaPredicted RBP6.29□□□□□ -1.4
ATG4C-204ENST00000414558 PIGOQ8TEQ8 1089 aa6.29□□□□□ -1.4
ATG4C-204ENST00000414558 CUL5Q93034 780 aa6.29□□□□□ -1.4
ATG4C-204ENST00000414558 PHKBQ93100 1093 aa6.29□□□□□ -1.4
ATG4C-204ENST00000414558 KRTAP9-8Q9BYQ0 159 aa6.29□□□□□ -1.4
ATG4C-204ENST00000414558 KLHL42Q9P2K6 505 aa6.29□□□□□ -1.4
ATG4C-204ENST00000414558 VPS51Q9UID3 782 aa6.29□□□□□ -1.4
ATG4C-204ENST00000414558 HPSEQ9Y251 543 aa6.29□□□□□ -1.4
ATG4C-204ENST00000414558 FCHO1O14526 889 aa6.28□□□□□ -1.4
ATG4C-204ENST00000414558 NTSR1P30989 418 aa6.28□□□□□ -1.4
ATG4C-204ENST00000414558 TXNL4AP83876 142 aaKnown RBP6.28□□□□□ -1.4
ATG4C-204ENST00000414558 GHRHRQ02643 423 aa6.28□□□□□ -1.4
ATG4C-204ENST00000414558 RANBP10Q6VN20 620 aa6.28□□□□□ -1.4
ATG4C-204ENST00000414558 DGKHQ86XP1 1220 aa6.28□□□□□ -1.4
ATG4C-204ENST00000414558 EDC3Q96F86 508 aaKnown RBP6.28□□□□□ -1.4
ATG4C-204ENST00000414558 FAM227BQ96M60 508 aa6.28□□□□□ -1.4
ATG4C-204ENST00000414558 ZNF48Q96MX3 618 aaPredicted RBP6.28□□□□□ -1.4
ATG4C-204ENST00000414558 TMEM79Q9BSE2 394 aa6.28□□□□□ -1.4
ATG4C-204ENST00000414558 TBC1D23Q9NUY8 699 aa6.28□□□□□ -1.4
ATG4C-204ENST00000414558 PI4KBQ9UBF8 816 aa6.28□□□□□ -1.4
ATG4C-204ENST00000414558 SLC27A6Q9Y2P4 619 aa6.28□□□□□ -1.4
ATG4C-204ENST00000414558 FER1L4A9Z1Z3 1794 aa6.28□□□□□ -1.4
ATG4C-204ENST00000414558 F8W8V4 182 aa6.27□□□□□ -1.41
ATG4C-204ENST00000414558 THAP12O43422 761 aa6.27□□□□□ -1.41
ATG4C-204ENST00000414558 IL18RAPO95256 599 aa6.27□□□□□ -1.41
ATG4C-204ENST00000414558 COPAP53621 1224 aa6.27□□□□□ -1.41
ATG4C-204ENST00000414558 HTRA4P83105 476 aaPredicted RBP6.27□□□□□ -1.41
ATG4C-204ENST00000414558 DAG1Q14118 895 aa6.27□□□□□ -1.41
ATG4C-204ENST00000414558 Q4G0T1 1027 aa6.27□□□□□ -1.41
ATG4C-204ENST00000414558 AWAT1Q58HT5 328 aa6.27□□□□□ -1.41
ATG4C-204ENST00000414558 CC2D1BQ5T0F9 858 aaKnown RBP6.27□□□□□ -1.41
ATG4C-204ENST00000414558 LIX1LQ8IVB5 337 aa6.27□□□□□ -1.41
ATG4C-204ENST00000414558 FMNL3Q8IVF7 1028 aa6.27□□□□□ -1.41
ATG4C-204ENST00000414558 C16orf71Q8IYS4 520 aaPredicted RBP6.27□□□□□ -1.41
ATG4C-204ENST00000414558 FSTL5Q8N475 847 aaPredicted RBP6.27□□□□□ -1.41
ATG4C-204ENST00000414558 ZNF366Q8N895 744 aa6.27□□□□□ -1.41
ATG4C-204ENST00000414558 MBD3L2Q8NHZ7 208 aaPredicted RBP6.27□□□□□ -1.41
ATG4C-204ENST00000414558 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.27□□□□□ -1.41
ATG4C-204ENST00000414558 TIFAQ96CG3 184 aa6.27□□□□□ -1.41
ATG4C-204ENST00000414558 IQCDQ96DY2 449 aa6.27□□□□□ -1.41
ATG4C-204ENST00000414558 NAF1Q96HR8 494 aaKnown RBP6.27□□□□□ -1.41
ATG4C-204ENST00000414558 HIC2Q96JB3 615 aa6.27□□□□□ -1.41
ATG4C-204ENST00000414558 ZC3H10Q96K80 434 aaKnown RBP6.27□□□□□ -1.41
ATG4C-204ENST00000414558 SELENOOQ9BVL4 669 aa6.27□□□□□ -1.41
ATG4C-204ENST00000414558 APOL5Q9BWW9 433 aa6.27□□□□□ -1.41
ATG4C-204ENST00000414558 SPRTNQ9H040 489 aaPredicted RBP6.27□□□□□ -1.41
ATG4C-204ENST00000414558 HEYLQ9NQ87 328 aaPredicted RBP6.27□□□□□ -1.41
ATG4C-204ENST00000414558 TRNAU1APQ9NX07 287 aaKnown RBP6.27□□□□□ -1.41
ATG4C-204ENST00000414558 ELOVL5Q9NYP7 299 aa6.27□□□□□ -1.41
ATG4C-204ENST00000414558 RHPN2P1A8MT19 583 aa6.26□□□□□ -1.41
ATG4C-204ENST00000414558 IGKV2-30P06310 120 aa6.26□□□□□ -1.41
ATG4C-204ENST00000414558 ATF7P17544 494 aaPredicted RBP6.26□□□□□ -1.41
ATG4C-204ENST00000414558 DEUP1Q05D60 604 aa6.26□□□□□ -1.41
ATG4C-204ENST00000414558 MFSD13AQ14CX5 517 aa6.26□□□□□ -1.41
ATG4C-204ENST00000414558 ANO7Q6IWH7 933 aa6.26□□□□□ -1.41
ATG4C-204ENST00000414558 MAP4K1Q92918 833 aa6.26□□□□□ -1.41
ATG4C-204ENST00000414558 SLC25A32Q9H2D1 315 aa6.26□□□□□ -1.41
ATG4C-204ENST00000414558 USP29Q9HBJ7 922 aa6.26□□□□□ -1.41
ATG4C-204ENST00000414558 DDX21Q9NR30 783 aaKnown RBP eCLIP6.26□□□□□ -1.41
ATG4C-204ENST00000414558 ASAP1Q9ULH1 1129 aa6.26□□□□□ -1.41
ATG4C-204ENST00000414558 CORO2BQ9UQ03 480 aa6.26□□□□□ -1.41
ATG4C-204ENST00000414558 COL15A1P39059 1388 aa6.26□□□□□ -1.41
ATG4C-204ENST00000414558 SETD1BQ9UPS6 1966 aaKnown RBP6.26□□□□□ -1.41
ATG4C-204ENST00000414558 CLIC1O00299 241 aa6.25□□□□□ -1.41
ATG4C-204ENST00000414558 PQBP1O60828 265 aaKnown RBP6.25□□□□□ -1.41
ATG4C-204ENST00000414558 TMEM225BP0DP42 221 aa6.25□□□□□ -1.41
ATG4C-204ENST00000414558 LAMB3Q13751 1172 aa6.25□□□□□ -1.41
ATG4C-204ENST00000414558 RABEP1Q15276 862 aa6.25□□□□□ -1.41
ATG4C-204ENST00000414558 TMTC4Q5T4D3 741 aa6.25□□□□□ -1.41
ATG4C-204ENST00000414558 KRT28Q7Z3Y7 464 aa6.25□□□□□ -1.41
ATG4C-204ENST00000414558 MRPL10Q7Z7H8 261 aaKnown RBP6.25□□□□□ -1.41
ATG4C-204ENST00000414558 KRT73Q86Y46 540 aa6.25□□□□□ -1.41
ATG4C-204ENST00000414558 NANOGP1Q8N7R0 232 aa6.25□□□□□ -1.41
ATG4C-204ENST00000414558 FAM71DQ8N9W8 422 aa6.25□□□□□ -1.41
ATG4C-204ENST00000414558 HMCESQ96FZ2 354 aa6.25□□□□□ -1.41
ATG4C-204ENST00000414558 CINPQ9BW66 212 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms