RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 USP38Q8NB14 1042 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 KIF12Q96FN5 646 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 CLPBQ9H078 707 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 PDGFCQ9NRA1 345 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 RHBDL2Q9NX52 303 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 COMMD3-BMI1R4GMX3 469 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 H3BQF6 201 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 LDLRP01130 860 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 SRGNP10124 158 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 GPC1P35052 558 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 DMPKQ09013 629 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 TUBA3CQ13748 450 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 CHI3L2Q15782 390 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 MFSD4BQ5TF39 518 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.6□□□□□ -1.19
PTPN3-203ENST00000412145 DDX53Q86TM3 631 aaKnown RBP7.6□□□□□ -1.19
PTPN3-203ENST00000412145 TIMMDC1Q9NPL8 285 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 PCDHB6Q9Y5E3 794 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 GNRH1P01148 92 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 PDGFRAP16234 1089 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 TGM2P21980 687 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 SKIV2L2P42285 1042 aaKnown RBP7.6□□□□□ -1.19
PTPN3-203ENST00000412145 NFIL3Q16649 462 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 DHX40Q8IX18 779 aaKnown RBP7.6□□□□□ -1.19
PTPN3-203ENST00000412145 MCOLN3Q8TDD5 553 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 ATXN2LQ8WWM7 1075 aaKnown RBP7.6□□□□□ -1.19
PTPN3-203ENST00000412145 MIEF2Q96C03 454 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 PPP1R10Q96QC0 940 aaKnown RBP7.6□□□□□ -1.19
PTPN3-203ENST00000412145 TBCBQ99426 244 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 SLC25A23Q9BV35 468 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 NIF3L1Q9GZT8 377 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 DSN1Q9H410 356 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 MDM4O15151 490 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 CYP2A7P20853 494 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 FMO5P49326 533 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 EXOSC10Q01780 885 aaKnown RBP7.6□□□□□ -1.19
PTPN3-203ENST00000412145 GRAPQ13588 217 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 TSGA10IPQ3SY00 556 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 ZDHHC17Q8IUH5 632 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 FMR1NBQ8N0W7 255 aaPredicted RBP7.6□□□□□ -1.19
PTPN3-203ENST00000412145 GRAPLQ8TC17 118 aaPredicted RBP7.6□□□□□ -1.19
PTPN3-203ENST00000412145 SPATA17Q96L03 361 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 CDHR2Q9BYE9 1310 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 NR2C2P49116 596 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 ATP12AP54707 1039 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 PDIA6Q15084 440 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 B3GNT6Q6ZMB0 384 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 METTL3Q86U44 580 aaKnown RBP7.6□□□□□ -1.19
PTPN3-203ENST00000412145 ATG16L2Q8NAA4 619 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 SLC38A2Q96QD8 506 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 GREM2Q9H772 168 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 GMIPQ9P107 970 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 SHOC2Q9UQ13 582 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 INPP5FQ9Y2H2 1132 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 UGGT1Q9NYU2 1555 aa7.6□□□□□ -1.19
PTPN3-203ENST00000412145 TPP2P29144 1249 aaPredicted RBP7.59□□□□□ -1.19
PTPN3-203ENST00000412145 TWF1Q12792 350 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 ZNF57Q68EA5 555 aaPredicted RBP7.59□□□□□ -1.19
PTPN3-203ENST00000412145 MIER2Q8N344 545 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 PDPRQ8NCN5 879 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 PROX1Q92786 737 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 ELOVL6Q9H5J4 265 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 CHORDC1Q9UHD1 332 aaPredicted RBP7.59□□□□□ -1.19
PTPN3-203ENST00000412145 FAM20BO75063 409 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 ODC1P11926 461 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 GZMAP12544 262 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 RARGP13631 454 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 CXCR2P25025 360 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 PRCPP42785 496 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 PAGE2BQ5JRK9 111 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 SPICE1Q8N0Z3 855 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 FAM120BQ96EK7 910 aaKnown RBP7.59□□□□□ -1.19
PTPN3-203ENST00000412145 PCSK1NQ9UHG2 260 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 PFDN2Q9UHV9 154 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 TBC1D30Q9Y2I9 924 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 CYP1A1P04798 512 aaPredicted RBP7.59□□□□□ -1.19
PTPN3-203ENST00000412145 GPD2P43304 727 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 STARP49675 285 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 CCNG1P51959 295 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 GPIHBP1Q8IV16 184 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 GRPEL2Q8TAA5 225 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 SLC35G2Q8TBE7 412 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 COQ6Q9Y2Z9 468 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 TTC26A0AVF1 554 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 FAM92AA1XBS5 289 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 KPNA5O15131 536 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 ATP9BO43861 1147 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 FARP2O94887 1054 aaPredicted RBP7.59□□□□□ -1.19
PTPN3-203ENST00000412145 SERPIND1P05546 499 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 VAV1P15498 845 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 PPIL2Q13356 520 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 QPRTQ15274 297 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 ZNF284Q2VY69 593 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 KSR1Q8IVT5 923 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 FAM217BQ9NTX9 383 aaPredicted RBP7.59□□□□□ -1.19
PTPN3-203ENST00000412145 POLIQ9UNA4 740 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 PIGBOS1A0A0B4J2F0 54 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 ERI2A8K979 691 aaKnown RBP7.59□□□□□ -1.19
PTPN3-203ENST00000412145 PLK4O00444 970 aa7.59□□□□□ -1.19
PTPN3-203ENST00000412145 REM1O75628 298 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms