RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.71□□□□□ -0.05
LIMS2-206ENST00000409754 MTRF1LQ9UGC7 380 aaKnown RBP14.71□□□□□ -0.05
LIMS2-206ENST00000409754 ASIC3Q9UHC3 531 aa14.71□□□□□ -0.05
LIMS2-206ENST00000409754 PCDHB8Q9UN66 801 aa14.71□□□□□ -0.05
LIMS2-206ENST00000409754 A0A1W2PPC1 479 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 CST8O60676 142 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 DAB1O75553 588 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 ITIH2P19823 946 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 MATKP42679 507 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 VCPP55072 806 aaKnown RBP14.7□□□□□ -0.06
LIMS2-206ENST00000409754 HDAC4P56524 1084 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 MAP3K7CLP57077 242 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 CALCOCO2Q13137 446 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 RAB6CQ53S08 254 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 SPRED2Q7Z698 418 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 MAP7D3Q8IWC1 876 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 COLGALT2Q8IYK4 626 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 SIX6OS1Q8N1H7 587 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 THEM5Q8N1Q8 247 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 CCDC89Q8N998 374 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 CCHCR1Q8TD31 782 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 HASPINQ8TF76 798 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 PIK3R5Q8WYR1 880 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 PKMYT1Q99640 499 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 SH3GL2Q99962 352 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 FAM118BQ9BPY3 351 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 RAB6CQ9H0N0 254 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.7□□□□□ -0.06
LIMS2-206ENST00000409754 DNPEPQ9ULA0 475 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 OPA1O60313 960 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 DDHD2O94830 711 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 ITGB1P05556 798 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 CD48P09326 243 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 MYOGP15173 224 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 IVDP26440 423 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 HSD17B3P37058 310 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 GATMP50440 423 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 RABGGTBP53611 331 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 CDH6P55285 790 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 DHX9Q08211 1270 aaKnown RBP14.7□□□□□ -0.06
LIMS2-206ENST00000409754 OASLQ15646 514 aaKnown RBP14.7□□□□□ -0.06
LIMS2-206ENST00000409754 MAPRE1Q15691 268 aaKnown RBP14.7□□□□□ -0.06
LIMS2-206ENST00000409754 RAB41Q5JT25 222 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 OVOS1Q6IE37 1185 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 SCYL2Q6P3W7 929 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 STRADAQ7RTN6 431 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 ZNF280BQ86YH2 543 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 RFX6Q8HWS3 928 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 ZMIZ2Q8NF64 920 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 SLC35B2Q8TB61 432 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 MYLPFQ96A32 169 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 SNF8Q96H20 258 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 ZIM3Q96PE6 472 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 RUFY1Q96T51 708 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 CSNK1G1Q9HCP0 422 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 TBC1D13Q9NVG8 400 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 YBX2Q9Y2T7 364 aaKnown RBP14.7□□□□□ -0.06
LIMS2-206ENST00000409754 SLC4A7Q9Y6M7 1214 aa14.7□□□□□ -0.06
LIMS2-206ENST00000409754 LCHNA4D1U4 455 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 ZNF487B1APH4 448 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 APOC4-APOC2K7ER74 178 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 B4GALT3O60512 393 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 APOC2P02655 101 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 ITGAVP06756 1048 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 ATF2P15336 505 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 KLRC2P26717 231 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 TKTL1P51854 596 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 YWHAZP63104 245 aaKnown RBP14.69□□□□□ -0.06
LIMS2-206ENST00000409754 FAM193AP78312 1265 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 CAV1Q03135 178 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 TFDP2Q14188 446 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 DPYSL3Q14195 570 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 KRT81Q14533 505 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 UAP1Q16222 522 aaPredicted RBP14.69□□□□□ -0.06
LIMS2-206ENST00000409754 LRIT3Q3SXY7 679 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 SLC25A52Q3SY17 297 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 LRIG3Q6UXM1 1119 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 HERC6Q8IVU3 1022 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 ALLCQ8N6M5 410 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 BBOF1Q8ND07 529 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 TOP1MTQ969P6 601 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 LRCH3Q96II8 777 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 SLC2A13Q96QE2 648 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 SNRNP25Q9BV90 132 aaKnown RBP14.69□□□□□ -0.06
LIMS2-206ENST00000409754 CALN1Q9BXU9 219 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 CNGB3Q9NQW8 809 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 ZNF148Q9UQR1 794 aa14.69□□□□□ -0.06
LIMS2-206ENST00000409754 HHLA1C9JL84 531 aa14.68□□□□□ -0.06
LIMS2-206ENST00000409754 KRT14P02533 472 aa14.68□□□□□ -0.06
LIMS2-206ENST00000409754 LINC00271P0C7V0 271 aa14.68□□□□□ -0.06
LIMS2-206ENST00000409754 ATP2A2P16615 1042 aaKnown RBP14.68□□□□□ -0.06
LIMS2-206ENST00000409754 TFE3P19532 575 aaPredicted RBP14.68□□□□□ -0.06
LIMS2-206ENST00000409754 NOS2P35228 1153 aa14.68□□□□□ -0.06
LIMS2-206ENST00000409754 DYNLT1P63172 113 aa14.68□□□□□ -0.06
LIMS2-206ENST00000409754 TSPY1Q01534 308 aa14.68□□□□□ -0.06
LIMS2-206ENST00000409754 OTUD4Q01804 1114 aaKnown RBP14.68□□□□□ -0.06
LIMS2-206ENST00000409754 RNASELQ05823 741 aaKnown RBP14.68□□□□□ -0.06
LIMS2-206ENST00000409754 HABP4Q5JVS0 413 aaKnown RBP14.68□□□□□ -0.06
LIMS2-206ENST00000409754 ERMARDQ5T6L9 678 aa14.68□□□□□ -0.06
LIMS2-206ENST00000409754 FAM117BQ6P1L5 589 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms