RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 TBC1D23Q9NUY8 699 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 HDAC9Q9UKV0 1011 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 NDRG4Q9ULP0 352 aaKnown RBP3.25□□□□□ -1.89
CD47-203ENST00000398258 TBC1D30Q9Y2I9 924 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 GPR52Q9Y2T5 361 aa3.25□□□□□ -1.89
CD47-203ENST00000398258 ACKR2O00590 384 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 CD3EAPO15446 510 aaKnown RBP3.24□□□□□ -1.89
CD47-203ENST00000398258 PROM1O43490 865 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 TRIAP1O43715 76 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 CBSLP0DN79 551 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 SRGNP10124 158 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 TPH1P17752 444 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 CBSP35520 551 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 NPTX2P47972 431 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 NDUFV1P49821 464 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 RENBPP51606 427 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 BCAT1P54687 386 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 POLE2P56282 527 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 NSUN2Q08J23 767 aaKnown RBP eCLIP3.24□□□□□ -1.89
CD47-203ENST00000398258 EZH2Q15910 746 aaKnown RBP3.24□□□□□ -1.89
CD47-203ENST00000398258 MTX3Q5HYI7 312 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.24□□□□□ -1.89
CD47-203ENST00000398258 TMTC4Q5T4D3 741 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 ICE2Q659A1 982 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 ATG9BQ674R7 924 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 RAP1GAP2Q684P5 730 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 ZNF626Q68DY1 528 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 CRTC1Q6UUV9 634 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 LAYNQ6UX15 382 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 TMEM108Q6UXF1 575 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 KCTD20Q7Z5Y7 419 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 DTX2Q86UW9 622 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 CPXCR1Q8N123 301 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.24□□□□□ -1.89
CD47-203ENST00000398258 MYCT1Q8N699 235 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 SMCR8Q8TEV9 937 aaPredicted RBP3.24□□□□□ -1.89
CD47-203ENST00000398258 LPIN2Q92539 896 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 UROC1Q96N76 676 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 PPP1R10Q96QC0 940 aaKnown RBP3.24□□□□□ -1.89
CD47-203ENST00000398258 KATNAL1Q9BW62 490 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 AMBRA1Q9C0C7 1298 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 PCDHAC1Q9H158 963 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 INTS13Q9NVM9 706 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 DACT1Q9NYF0 836 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 LRIT1Q9P2V4 623 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 GRHPRQ9UBQ7 328 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 GJD2Q9UKL4 321 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 ZMYND8Q9ULU4 1186 aaPredicted RBP3.24□□□□□ -1.89
CD47-203ENST00000398258 MAGED2Q9UNF1 606 aaPredicted RBP3.24□□□□□ -1.89
CD47-203ENST00000398258 PCDHGB3Q9Y5G1 929 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 COL15A1P39059 1388 aa3.24□□□□□ -1.89
CD47-203ENST00000398258 ZNF804BA4D1E1 1349 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 A0A0B4J269 797 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 ADM5C9JUS6 153 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 hCG_1984214I3L0E3 225 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 YY2O15391 372 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 CBFA2T3O75081 653 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 PIAS2O75928 621 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 BMP15O95972 392 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 DHRS4L1P0CG22 281 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 ARP10275 920 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 PPP3CBP16298 524 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 NPPBP16860 134 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 CD6P30203 668 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 ATICP31939 592 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 ITGA8P53708 1063 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 ARL4CP56559 192 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 KRT17Q04695 432 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 PPFIA1Q13136 1202 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 TUBB3Q13509 450 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 FHL3Q13643 280 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 ATP1A4Q13733 1029 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 CCNIQ14094 377 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 EFR3AQ14156 821 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 E2F2Q14209 437 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 CLCA4Q14CN2 919 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 TRIM60Q495X7 471 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 RBM20Q5T481 1227 aaKnown RBP3.23□□□□□ -1.89
CD47-203ENST00000398258 CERCAMQ5T4B2 595 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 FAXCQ5TGI0 409 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 LIN54Q6MZP7 749 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 FBXO38Q6PIJ6 1188 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 USP49Q70CQ1 688 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 LNX2Q8N448 690 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 TOR1AIP2Q8NFQ8 470 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 MBD3L2Q8NHZ7 208 aaPredicted RBP3.23□□□□□ -1.89
CD47-203ENST00000398258 MYCBPAPQ8TBZ2 947 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 OTUD7AQ8TE49 926 aaPredicted RBP3.23□□□□□ -1.89
CD47-203ENST00000398258 IPO4Q8TEX9 1081 aaKnown RBP3.23□□□□□ -1.89
CD47-203ENST00000398258 CCT6BQ92526 530 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 KAT6AQ92794 2004 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 PPP2R3CQ969Q6 453 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 SARAFQ96BY9 339 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 TBC1D20Q96BZ9 403 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 RSPRY1Q96DX4 576 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 SCLT1Q96NL6 688 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 WDR24Q96S15 920 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 NUDT22Q9BRQ3 303 aa3.23□□□□□ -1.89
CD47-203ENST00000398258 DDX23Q9BUQ8 820 aaKnown RBP3.23□□□□□ -1.89
CD47-203ENST00000398258 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms