RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 GPBP1L1Q9HC44 474 aaPredicted RBP12.98□□□□□ -0.33
CDX2-201ENST00000381020 STYXL1Q9Y6J8 313 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 A0A1B0GUA9 196 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 TRAPPC3O43617 180 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 BNIP3LO60238 219 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 NUDT17P0C025 328 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 SETSIPP0DME0 302 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 LMO2P25791 158 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 CRADDP78560 199 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 PCSK7Q16549 785 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 PDCD7Q8N8D1 485 aaKnown RBP12.98□□□□□ -0.33
CDX2-201ENST00000381020 GLIS1Q8NBF1 620 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 ARMC2Q8NEN0 867 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 UBN1Q9NPG3 1134 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 SIX4Q9UIU6 781 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 ADAMTSL1Q8N6G6 1762 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 CIB2O75838 187 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 SNAI1O95863 264 aaPredicted RBP12.97□□□□□ -0.33
CDX2-201ENST00000381020 ESRRAP11474 423 aaPredicted RBP12.97□□□□□ -0.33
CDX2-201ENST00000381020 PTPN1P18031 435 aaKnown RBP12.97□□□□□ -0.33
CDX2-201ENST00000381020 NCF2P19878 526 aaPredicted RBP12.97□□□□□ -0.33
CDX2-201ENST00000381020 CDKN2BP42772 138 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 ARFIP2P53365 341 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 GHRHRQ02643 423 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 C9orf57Q5W0N0 161 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 ANKRD23Q86SG2 305 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 CRLF3Q8IUI8 442 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 CFAP61Q8NHU2 1237 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 ZNF669Q96BR6 464 aaPredicted RBP12.97□□□□□ -0.33
CDX2-201ENST00000381020 SEPT5Q99719 369 aaPredicted RBP12.97□□□□□ -0.33
CDX2-201ENST00000381020 ZFP69BQ9UJL9 534 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 SERPINB6P35237 376 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 ATXN1P54253 815 aaKnown RBP12.97□□□□□ -0.33
CDX2-201ENST00000381020 NBPF20Q3BBV1 942 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 MGAT5BQ3V5L5 792 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 SCARA3Q6AZY7 606 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 RASSF3Q86WH2 238 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 RNF135Q8IUD6 432 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 B3GALNT2Q8NCR0 500 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 OR6P1Q8NGX9 317 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 GABPB2Q8TAK5 448 aaPredicted RBP12.97□□□□□ -0.33
CDX2-201ENST00000381020 PDCD6IPQ8WUM4 868 aaKnown RBP12.97□□□□□ -0.33
CDX2-201ENST00000381020 RNF157Q96PX1 679 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 LHX5Q9H2C1 402 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 IPPQ9Y573 584 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 RPS6KL1Q9Y6S9 549 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 SNRPAP09012 282 aaKnown RBP12.97□□□□□ -0.33
CDX2-201ENST00000381020 PCK1P35558 622 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 FLT3LGP49771 235 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 GBP7Q8N8V2 638 aaPredicted RBP12.97□□□□□ -0.33
CDX2-201ENST00000381020 IPMKQ8NFU5 416 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 STAMBPL1Q96FJ0 436 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 SDCBP2Q9H190 292 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 ZDHHC18Q9NUE0 388 aa12.97□□□□□ -0.33
CDX2-201ENST00000381020 JCHAINP01591 159 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 IL1R2P27930 398 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 CD52P31358 61 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 ATG16L1Q676U5 607 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.96□□□□□ -0.33
CDX2-201ENST00000381020 RNF180Q86T96 592 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 RAB3IPQ96QF0 476 aaPredicted RBP12.96□□□□□ -0.33
CDX2-201ENST00000381020 TXLNGQ9NUQ3 528 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 TAF1LQ8IZX4 1826 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 C2CD2LO14523 706 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 PMPCBO75439 489 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 PYGBP11216 843 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 ODC1P11926 461 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 ELNP15502 786 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 HOXD10P28358 340 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 RGMBQ6NW40 437 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 LCLAT1Q6UWP7 414 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 RFX8Q6ZV50 586 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 TRIM42Q8IWZ5 723 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 ANKRD52Q8NB46 1076 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 COLGALT1Q8NBJ5 622 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 EXT2Q93063 718 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 TSSK1BQ9BXA7 367 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 SSX2IPQ9Y2D8 614 aa12.96□□□□□ -0.33
CDX2-201ENST00000381020 TRPA1O75762 1119 aa12.96□□□□□ -0.34
CDX2-201ENST00000381020 BAG2O95816 211 aa12.96□□□□□ -0.34
CDX2-201ENST00000381020 IQCF3P0C7M6 154 aa12.96□□□□□ -0.34
CDX2-201ENST00000381020 GOT1P17174 413 aa12.96□□□□□ -0.34
CDX2-201ENST00000381020 ANKRD20A8PQ5CZ79 823 aa12.96□□□□□ -0.34
CDX2-201ENST00000381020 TRIM68Q6AZZ1 485 aa12.96□□□□□ -0.34
CDX2-201ENST00000381020 CLEC4CQ8WTT0 213 aa12.96□□□□□ -0.34
CDX2-201ENST00000381020 PPP1R36Q96LQ0 422 aa12.96□□□□□ -0.34
CDX2-201ENST00000381020 TBCBQ99426 244 aa12.96□□□□□ -0.34
CDX2-201ENST00000381020 LGMNQ99538 433 aa12.96□□□□□ -0.34
CDX2-201ENST00000381020 PCDHGC3Q9UN70 934 aa12.96□□□□□ -0.34
CDX2-201ENST00000381020 NR2E3Q9Y5X4 410 aa12.96□□□□□ -0.34
CDX2-201ENST00000381020 WNK3Q9BYP7 1800 aa12.96□□□□□ -0.34
CDX2-201ENST00000381020 CRCPO75575 148 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 DCTN3O75935 186 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 MX2P20592 715 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 GJA5P36382 358 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 POU5F1BQ06416 359 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 QPCTQ16769 361 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 KBTBD12Q3ZCT8 623 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 OVOS1Q6IE37 1185 aa12.95□□□□□ -0.34
CDX2-201ENST00000381020 C15orf39Q6ZRI6 1047 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms