RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 ALDH1A3P47895 512 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 TAB1Q15750 504 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 NDUFA5Q16718 116 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 KYAT3Q6YP21 454 aaKnown RBP17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 KLHL23Q8NBE8 558 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 PI4K2AQ9BTU6 479 aa17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 TRMT6Q9UJA5 497 aaKnown RBP17.61■□□□□ 0.41
COL4A3BP-203ENST00000380494 DRD4P21917 467 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 PCSK7Q16549 785 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 SAMD4BQ5PRF9 694 aaKnown RBP17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 TMEM143Q96AN5 459 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 RUSC1Q9BVN2 902 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 REXO4Q9GZR2 422 aaKnown RBP17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.6■□□□□ 0.413e-8■■■■□ 25.6
COL4A3BP-203ENST00000380494 ACOT9Q9Y305 439 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 CENPXA8MT69 81 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 BTNL10A8MVZ5 291 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 NUP62P37198 522 aaPredicted RBP17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 PDZK1Q5T2W1 519 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 TMEM63BQ5T3F8 832 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 ZNF618Q5T7W0 954 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 N4BP2L1Q5TBK1 243 aaPredicted RBP17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 CYP4Z1Q86W10 505 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 DHRSXQ8N5I4 330 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 SLC7A14Q8TBB6 771 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 SRPK1Q96SB4 655 aaKnown RBP17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 TMEM121Q9BTD3 319 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 KRT84Q9NSB2 600 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 RRN3Q9NYV6 651 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 PCDHGC5Q9Y5F6 944 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 ZSCAN5CA6NGD5 496 aaPredicted RBP17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 KATNA1O75449 491 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 PSMC6P62333 389 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 MTM1Q13496 603 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 PDK3Q15120 406 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 EPC2Q52LR7 807 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 AGKQ53H12 422 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 OTOAQ7RTW8 1153 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 SPATA17Q96L03 361 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 TMCC3Q9ULS5 477 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 TCF3P15923 654 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 SERPINH1P50454 418 aaKnown RBP17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 TRAF2Q12933 501 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 ZNF554Q86TJ5 538 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 UGT2B28Q9BY64 529 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 KCTD10Q9H3F6 313 aa17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 IARS2Q9NSE4 1012 aaKnown RBP17.6■□□□□ 0.41
COL4A3BP-203ENST00000380494 TRDMT1O14717 391 aaKnown RBP17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 ECE2O60344 883 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 GRAP2O75791 330 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 GRIK1P39086 918 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 ANXA11P50995 505 aaKnown RBP17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 GIT2Q14161 759 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 PARP6Q2NL67 630 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 ACSF2Q96CM8 615 aaPredicted RBP17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 TDRD3Q9H7E2 651 aaKnown RBP17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 NMRK1Q9NWW6 199 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 PRR23AA6NEV1 266 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 SLC37A4O43826 429 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 MAGEA10P43363 369 aaPredicted RBP17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 PPP3CCP48454 512 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 TROAPQ12815 778 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 NEDD8Q15843 81 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 ATF7IP2Q5U623 682 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 CDH24Q86UP0 819 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 SGF29Q96ES7 293 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 C6orf62Q9GZU0 229 aaPredicted RBP17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 KLHL31Q9H511 634 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 GPRC5DQ9NZD1 345 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 ADGRB3O60242 1522 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 POLRMTO00411 1230 aaKnown RBP17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 PRIM2P49643 509 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 COX10Q12887 443 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 AAGABQ6PD74 315 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 ABCA9Q8IUA7 1624 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 TRIM13O60858 407 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 MLNP12872 115 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 GPSM2P81274 684 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 SPANXN2Q5MJ10 180 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 OLFML1Q6UWY5 402 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 CCDC149Q6ZUS6 474 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 DHDDSQ86SQ9 333 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 CPNE1Q99829 537 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 MAP3K20Q9NYL2 800 aaKnown RBP17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 TMEM94Q12767 1356 aa17.59■□□□□ 0.41
COL4A3BP-203ENST00000380494 SOAT1P35610 550 aa17.58■□□□□ 0.41
COL4A3BP-203ENST00000380494 ITGA1P56199 1179 aa17.58■□□□□ 0.41
COL4A3BP-203ENST00000380494 FBXW4P57775 412 aa17.58■□□□□ 0.41
COL4A3BP-203ENST00000380494 DGKDQ16760 1214 aa17.58■□□□□ 0.41
COL4A3BP-203ENST00000380494 KCTD21Q4G0X4 260 aa17.58■□□□□ 0.41
COL4A3BP-203ENST00000380494 FAXCQ5TGI0 409 aa17.58■□□□□ 0.41
COL4A3BP-203ENST00000380494 TIGD7Q6NT04 549 aaPredicted RBP17.58■□□□□ 0.41
COL4A3BP-203ENST00000380494 PABPC5Q96DU9 382 aaKnown RBP17.58■□□□□ 0.41
COL4A3BP-203ENST00000380494 NSMCE2Q96MF7 247 aa17.58■□□□□ 0.41
COL4A3BP-203ENST00000380494 ITM2BQ9Y287 266 aa17.58■□□□□ 0.41
COL4A3BP-203ENST00000380494 ABHD2P08910 425 aa17.58■□□□□ 0.41
COL4A3BP-203ENST00000380494 NUDT17P0C025 328 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms