RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 FDXACB1Q9BRP7 624 aaPredicted RBP14.52□□□□□ -0.09
HMGCL-203ENST00000374490 DNAI2Q9GZS0 605 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 RNPEPQ9H4A4 650 aa14.52□□□□□ -0.09
HMGCL-203ENST00000374490 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.52□□□□□ -0.09
HMGCL-203ENST00000374490 SAE1Q9UBE0 346 aaPredicted RBP14.52□□□□□ -0.09
HMGCL-203ENST00000374490 BRCA2P51587 3418 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 APOL1O14791 398 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 INHBAP08476 426 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 IQCF3P0C7M6 154 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 ARF4P18085 180 aaPredicted RBP14.51□□□□□ -0.09
HMGCL-203ENST00000374490 SCNN1AP37088 669 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 ADCYAP1R1P41586 468 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 MAGEA6P43360 314 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 IGBP1P78318 339 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 ZNF200P98182 395 aaPredicted RBP14.51□□□□□ -0.09
HMGCL-203ENST00000374490 ATP11AP98196 1134 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 SLC45A4Q5BKX6 768 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 CHSY1Q86X52 802 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 CDKL3Q8IVW4 592 aaPredicted RBP14.51□□□□□ -0.09
HMGCL-203ENST00000374490 NPLOC4Q8TAT6 608 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 UBA3Q8TBC4 463 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 STK32AQ8WU08 396 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 C10orf82Q8WW14 230 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 FAF2Q96CS3 445 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 LRRC39Q96DD0 335 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 PEBP4Q96S96 227 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 WDR83Q9BRX9 315 aaKnown RBP14.51□□□□□ -0.09
HMGCL-203ENST00000374490 TUBB6Q9BUF5 446 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 KATNBL1Q9H079 304 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 LRMDAQ9H2I8 198 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 CYLDQ9NQC7 956 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 GGT7Q9UJ14 662 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 MCM8Q9UJA3 840 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 TSPAN16Q9UKR8 245 aa14.51□□□□□ -0.09
HMGCL-203ENST00000374490 BCLAF3A2AJT9 711 aaKnown RBP14.5□□□□□ -0.09
HMGCL-203ENST00000374490 C2CD2LO14523 706 aa14.5□□□□□ -0.09
HMGCL-203ENST00000374490 TNPO2O14787 897 aaKnown RBP14.5□□□□□ -0.09
HMGCL-203ENST00000374490 MDM4O15151 490 aa14.5□□□□□ -0.09
HMGCL-203ENST00000374490 BANF1O75531 89 aa14.5□□□□□ -0.09
HMGCL-203ENST00000374490 IL1BP01584 269 aa14.5□□□□□ -0.09
HMGCL-203ENST00000374490 ZFXP17010 805 aaPredicted RBP14.5□□□□□ -0.09
HMGCL-203ENST00000374490 SDC4P31431 198 aa14.5□□□□□ -0.09
HMGCL-203ENST00000374490 ORC1Q13415 861 aa14.5□□□□□ -0.09
HMGCL-203ENST00000374490 GOLGA7BQ2TAP0 167 aa14.5□□□□□ -0.09
HMGCL-203ENST00000374490 MORN1Q5T089 497 aa14.5□□□□□ -0.09
HMGCL-203ENST00000374490 LGSNQ5TDP6 509 aa14.5□□□□□ -0.09
HMGCL-203ENST00000374490 CHRDL2Q6WN34 429 aa14.5□□□□□ -0.09
HMGCL-203ENST00000374490 CYP4V2Q6ZWL3 525 aaPredicted RBP14.5□□□□□ -0.09
HMGCL-203ENST00000374490 GIMAP7Q8NHV1 300 aa14.5□□□□□ -0.09
HMGCL-203ENST00000374490 SLC44A1Q8WWI5 657 aa14.5□□□□□ -0.09
HMGCL-203ENST00000374490 ERP27Q96DN0 273 aa14.5□□□□□ -0.09
HMGCL-203ENST00000374490 APOPT1Q96IL0 206 aa14.5□□□□□ -0.09
HMGCL-203ENST00000374490 ZNF670Q9BS34 389 aa14.5□□□□□ -0.09
HMGCL-203ENST00000374490 KLC2Q9H0B6 622 aa14.5□□□□□ -0.09
HMGCL-203ENST00000374490 MYLK2Q9H1R3 596 aa14.5□□□□□ -0.09
HMGCL-203ENST00000374490 CHMP2BQ9UQN3 213 aa14.5□□□□□ -0.09
HMGCL-203ENST00000374490 TCRBV7S3A2A0A539 114 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 E5RJQ4 531 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 TRDMT1O14717 391 aaKnown RBP14.49□□□□□ -0.09
HMGCL-203ENST00000374490 TSPAN1O60635 241 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 ZBED1O96006 694 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 ELK3P41970 407 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 SLC6A3Q01959 620 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 GAD2Q05329 585 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 SLC18A2Q05940 514 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 PTK7Q13308 1070 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 EFTUD2Q15029 972 aaKnown RBP eCLIP14.49□□□□□ -0.09
HMGCL-203ENST00000374490 TAF5Q15542 800 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 DUSP28Q4G0W2 176 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 GJC2Q5T442 439 aaPredicted RBP14.49□□□□□ -0.09
HMGCL-203ENST00000374490 SLC9A4Q6AI14 798 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 IQSEC1Q6DN90 963 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 MTHFD1LQ6UB35 978 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 OTOAQ7RTW8 1153 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 UNC93AQ86WB7 457 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 TRIM42Q8IWZ5 723 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 MCUQ8NE86 351 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 NLRP7Q8WX94 980 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 MRRFQ96E11 262 aaKnown RBP14.49□□□□□ -0.09
HMGCL-203ENST00000374490 KIF12Q96FN5 646 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 CPB2Q96IY4 423 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 SLC4A5Q9BY07 1137 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 C10orf88Q9H8K7 445 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 PRDM16Q9HAZ2 1276 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 ETNK1Q9HBU6 452 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 SAR1AQ9NR31 198 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 NOP53Q9NZM5 478 aaKnown RBP14.49□□□□□ -0.09
HMGCL-203ENST00000374490 HESX1Q9UBX0 185 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 ZNF180Q9UJW8 692 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 GRID1Q9ULK0 1009 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 RPL26L1Q9UNX3 145 aaKnown RBP14.49□□□□□ -0.09
HMGCL-203ENST00000374490 CHKBQ9Y259 395 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 NR2E3Q9Y5X4 410 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 TEX264Q9Y6I9 313 aa14.49□□□□□ -0.09
HMGCL-203ENST00000374490 PFKMP08237 780 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 KRT16P08779 473 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 CYP3A5P20815 502 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 RGS2P41220 211 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 FLT3LGP49771 235 aa14.48□□□□□ -0.09
HMGCL-203ENST00000374490 NEK3P51956 506 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms