RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 FAM155BO75949 473 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 PDGFRBP09619 1106 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 MAGEA3P43357 314 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 C6orf118Q5T5N4 469 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 FAM35AQ86V20 835 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 TMEM121Q9BTD3 319 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 DDX43Q9NXZ2 648 aaKnown RBP13.11□□□□□ -0.31
PRPF4-202ENST00000374199 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.11□□□□□ -0.31
PRPF4-202ENST00000374199 DCDC2CA8MYV0 355 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 DGKIO75912 1065 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 ADCY8P40145 1251 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 NR2C2P49116 596 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 ZC3H12AQ5D1E8 599 aaKnown RBP13.11□□□□□ -0.31
PRPF4-202ENST00000374199 ZNF365Q70YC5 407 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 CD99L2Q8TCZ2 262 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 PCED1BQ96HM7 432 aa13.11□□□□□ -0.31
PRPF4-202ENST00000374199 NOS2P35228 1153 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 RPL22P35268 128 aaKnown RBP13.1□□□□□ -0.31
PRPF4-202ENST00000374199 CACNA2D1P54289 1103 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 DAOAP59103 153 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 MMRN1Q13201 1228 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 DPF3Q92784 378 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 FAM118BQ9BPY3 351 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 SYT15Q9BQS2 421 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 CAPS2Q9BXY5 557 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 WDR6Q9NNW5 1121 aaKnown RBP13.1□□□□□ -0.31
PRPF4-202ENST00000374199 CFAP69A5D8W1 941 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 CTSHP09668 335 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 ZSCAN5DPP0CG00 497 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 MDH1P40925 334 aaKnown RBP13.1□□□□□ -0.31
PRPF4-202ENST00000374199 HCAR3P49019 387 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 DPYSQ14117 519 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 INTS6LQ5JSJ4 861 aaKnown RBP13.1□□□□□ -0.31
PRPF4-202ENST00000374199 KAZNQ674X7 775 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 DCLRE1AQ6PJP8 1040 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 UNC45BQ8IWX7 931 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 PPIL6Q8IXY8 311 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 RSPH1Q8WYR4 309 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 CCDC114Q96M63 670 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 KCTD15Q96SI1 283 aaPredicted RBP13.1□□□□□ -0.31
PRPF4-202ENST00000374199 PPCSQ9HAB8 311 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 PCSK1NQ9UHG2 260 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 ACTL7BQ9Y614 415 aa13.1□□□□□ -0.31
PRPF4-202ENST00000374199 B4GALT3O60512 393 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 C1QAP02745 245 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 GHRP10912 638 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 ODC1P11926 461 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 ETS1P14921 441 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 ADORA2BP29275 332 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 APLP1P51693 650 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 LLGL1Q15334 1064 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 C4orf22Q6V702 233 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 PRUNE1Q86TP1 453 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 MAP7D3Q8IWC1 876 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 TTC25Q96NG3 672 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 NRDE2Q9H7Z3 1164 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 CNOT10Q9H9A5 744 aaKnown RBP13.09□□□□□ -0.31
PRPF4-202ENST00000374199 RRN3Q9NYV6 651 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 PCDHB8Q9UN66 801 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 NEU3Q9UQ49 428 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 CDH6P55285 790 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 YWHAZP63104 245 aaKnown RBP13.09□□□□□ -0.31
PRPF4-202ENST00000374199 PPP2R2AP63151 447 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 MDH1BQ5I0G3 518 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 CLLU1OSQ5K130 101 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 KLHDC8BQ8IXV7 354 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 COLGALT2Q8IYK4 626 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 RNF169Q8NCN4 708 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 QKIQ96PU8 341 aaKnown RBP eCLIP13.09□□□□□ -0.31
PRPF4-202ENST00000374199 ADAM2Q99965 735 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 SAE1Q9UBE0 346 aaPredicted RBP13.09□□□□□ -0.31
PRPF4-202ENST00000374199 MYBPHLA2RUH7 354 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 TNFRSF10BO14763 440 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 CHADO15335 359 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 OAZ2O95190 189 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 FAM200BP0CF97 657 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 GJC1P36383 396 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 ADIGQ0VDE8 80 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 NCBP2-AS2Q69YL0 99 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 GPRIN1Q7Z2K8 1008 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 RIBC1Q8N443 379 aaPredicted RBP13.09□□□□□ -0.31
PRPF4-202ENST00000374199 CCDC185Q8N715 623 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 HSPH1Q92598 858 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 SMARCD1Q96GM5 515 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 CSPG4P5Q96PW8 444 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 POPDC2Q9HBU9 364 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 ZNF148Q9UQR1 794 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 MICAL3Q7RTP6 2002 aa13.09□□□□□ -0.31
PRPF4-202ENST00000374199 ATXN2Q99700 1313 aaKnown RBP13.08□□□□□ -0.32
PRPF4-202ENST00000374199 ARVCFO00192 962 aa13.08□□□□□ -0.32
PRPF4-202ENST00000374199 CLDN5O00501 218 aa13.08□□□□□ -0.32
PRPF4-202ENST00000374199 GCATO75600 419 aa13.08□□□□□ -0.32
PRPF4-202ENST00000374199 INHAP05111 366 aa13.08□□□□□ -0.32
PRPF4-202ENST00000374199 ZFXP17010 805 aaPredicted RBP13.08□□□□□ -0.32
PRPF4-202ENST00000374199 PCSK1P29120 753 aa13.08□□□□□ -0.32
PRPF4-202ENST00000374199 SSR1P43307 286 aaKnown RBP13.08□□□□□ -0.32
PRPF4-202ENST00000374199 SLC18A1P54219 525 aa13.08□□□□□ -0.32
PRPF4-202ENST00000374199 MRPL58Q14197 206 aaKnown RBP13.08□□□□□ -0.32
PRPF4-202ENST00000374199 SLC24A5Q71RS6 500 aa13.08□□□□□ -0.32
PRPF4-202ENST00000374199 ARFGAP2Q8N6H7 521 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms