RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 CACNB3P54284 484 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 RC3H1Q5TC82 1133 aaKnown RBP12.73□□□□□ -0.37
TRERF1-202ENST00000354325 NIPA1Q7RTP0 329 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 DDHD1Q8NEL9 900 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 MCEEQ96PE7 176 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 GJA3Q9Y6H8 435 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 GRIN3BO60391 1043 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 CDKN2BP42772 138 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 RARRES1P49788 294 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 FNBP1LQ5T0N5 605 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 RWDD4Q6NW29 188 aaKnown RBP12.73□□□□□ -0.37
TRERF1-202ENST00000354325 BNC2Q6ZN30 1099 aaPredicted RBP12.73□□□□□ -0.37
TRERF1-202ENST00000354325 TMC7Q7Z402 723 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 NLGN1Q8N2Q7 840 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 ZNF276Q8N554 614 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 MCPH1Q8NEM0 835 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 SPIRE2Q8WWL2 714 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 FAIMQ9NVQ4 179 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 TUBA8Q9NY65 449 aaPredicted RBP12.73□□□□□ -0.37
TRERF1-202ENST00000354325 PKD2L1Q9P0L9 805 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.73□□□□□ -0.37
TRERF1-202ENST00000354325 PHLPP1O60346 1717 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 ITGB4P16144 1822 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 MEI4A8MW99 385 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 APOC4-APOC2K7ER74 178 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 WDR46O15213 610 aaKnown RBP12.73□□□□□ -0.37
TRERF1-202ENST00000354325 APOC2P02655 101 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 FGFR1P11362 822 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 ZNF12P17014 697 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 PSMC5P62195 406 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 NAB1Q13506 487 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 ART3Q13508 389 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 DPYSL3Q14195 570 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 C1orf220Q5T0J3 134 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 SMYD1Q8NB12 490 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 TSPAN14Q8NG11 270 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 ZNF526Q8TF50 670 aaPredicted RBP12.73□□□□□ -0.37
TRERF1-202ENST00000354325 MZB1Q8WU39 189 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 JDP2Q8WYK2 163 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 MXRA8Q9BRK3 442 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 NHSQ6T4R5 1651 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 EXTL3O43909 919 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 YWHABP31946 246 aaKnown RBP12.73□□□□□ -0.37
TRERF1-202ENST00000354325 GABRB2P47870 512 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 SLC1A6P48664 564 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 CD97P48960 835 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 MTTPP55157 894 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 DPYSQ14117 519 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 GRIK5Q16478 980 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 TMEM132AQ24JP5 1023 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 FASTKD1Q53R41 847 aaKnown RBP12.73□□□□□ -0.37
TRERF1-202ENST00000354325 MCF2L2Q86YR7 1114 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 CYP2W1Q8TAV3 490 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 ARHGEF4Q9NR80 690 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 STK39Q9UEW8 545 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 MYRFQ9Y2G1 1151 aa12.73□□□□□ -0.37
TRERF1-202ENST00000354325 H0YJX3 145 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 NDUFB10O96000 172 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 ALDH1B1P30837 517 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 HK2P52789 917 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 NCOA4Q13772 614 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 UBAP2LQ14157 1087 aaKnown RBP12.72□□□□□ -0.37
TRERF1-202ENST00000354325 TTLL12Q14166 644 aaPredicted RBP12.72□□□□□ -0.37
TRERF1-202ENST00000354325 IYDQ6PHW0 289 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 HHIPL2Q6UWX4 724 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 GPR141Q7Z602 305 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 NIPA2Q8N8Q9 360 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 THAP11Q96EK4 314 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 OSBPL6Q9BZF3 934 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 ZBTB21Q9ULJ3 1066 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 DCAF8L1A6NGE4 600 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 CAPN8A6NHC0 703 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 PPEF1O14829 653 aaPredicted RBP12.72□□□□□ -0.37
TRERF1-202ENST00000354325 CDK9P50750 372 aaKnown RBP12.72□□□□□ -0.37
TRERF1-202ENST00000354325 ACAP1Q15027 740 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 PTF1AQ7RTS3 328 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 FAM160B2Q86V87 743 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 KYQ8NBH2 561 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 RIN3Q8TB24 985 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 PLEKHO2Q8TD55 490 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 ITPKCQ96DU7 683 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 PRR11Q96HE9 360 aaPredicted RBP12.72□□□□□ -0.37
TRERF1-202ENST00000354325 USP29Q9HBJ7 922 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 SF3B1O75533 1304 aaKnown RBP eCLIP12.72□□□□□ -0.37
TRERF1-202ENST00000354325 C2orf71A6NGG8 1288 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 HSPA4LO95757 839 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 ZBED1O96006 694 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 APOEP02649 317 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 CDK4P11802 303 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 BORCS5Q969J3 196 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 EME1Q96AY2 570 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 FAM213AQ9BRX8 229 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 WDR18Q9BV38 432 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 OSBPL11Q9BXB4 747 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 VPS33BQ9H267 617 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 APPL1Q9UKG1 709 aa12.72□□□□□ -0.37
TRERF1-202ENST00000354325 SH3PXD2BA1X283 911 aa12.71□□□□□ -0.37
TRERF1-202ENST00000354325 ZNF189O75820 626 aaPredicted RBP12.71□□□□□ -0.37
TRERF1-202ENST00000354325 MMP8P22894 467 aa12.71□□□□□ -0.37
TRERF1-202ENST00000354325 HIRAP54198 1017 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms