RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 CABYRO75952 493 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 WFS1O76024 890 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 T-ENOLP0DO92 83 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 PECAM1P16284 738 aaPredicted RBP8.97□□□□□ -0.97
TRIM55-204ENST00000353317 KRT15P19012 456 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 RBP5P82980 135 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 SPARCL1Q14515 664 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 SLC1A5Q15758 541 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 PDK4Q16654 411 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 PARP6Q2NL67 630 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 RGS9BPQ6ZS82 235 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 SLC7A6OSQ96CW6 309 aaPredicted RBP8.97□□□□□ -0.97
TRIM55-204ENST00000353317 ADAM2Q99965 735 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 UBN1Q9NPG3 1134 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 ZMYND8Q9ULU4 1186 aaPredicted RBP8.97□□□□□ -0.97
TRIM55-204ENST00000353317 NOD1Q9Y239 953 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 SNX9Q9Y5X1 595 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 A0A1W2PPM1 405 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 ARL5CA6NH57 179 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 EDF1O60869 148 aaKnown RBP8.97□□□□□ -0.97
TRIM55-204ENST00000353317 CHRM1P11229 460 aaPredicted RBP8.97□□□□□ -0.97
TRIM55-204ENST00000353317 LMO2P25791 158 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 ABL2P42684 1182 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 ARSEP51690 589 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 NDST1P52848 882 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 ATN1P54259 1190 aaPredicted RBP8.97□□□□□ -0.97
TRIM55-204ENST00000353317 PRMT2P55345 433 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 RPL7AP62424 266 aaKnown RBP8.97□□□□□ -0.97
TRIM55-204ENST00000353317 NR1H3Q13133 447 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 DENND1BQ6P3S1 775 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 TDRPQ86YL5 185 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 FAM126BQ8IXS8 530 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 FAM13CQ8NE31 585 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 DIS3LQ8TF46 1054 aaKnown RBP8.97□□□□□ -0.97
TRIM55-204ENST00000353317 KBTBD7Q8WVZ9 684 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 MRRFQ96E11 262 aaKnown RBP8.97□□□□□ -0.97
TRIM55-204ENST00000353317 SPDL1Q96EA4 605 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 DPEP3Q9H4B8 488 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 ZNF148Q9UQR1 794 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 GPR182O15218 404 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 TYROBPO43914 113 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 NBNO60934 754 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 PEX11AO75192 247 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 SMNDC1O75940 238 aaKnown RBP eCLIP8.96□□□□□ -0.97
TRIM55-204ENST00000353317 ATP5HO75947 161 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 CBX6O95503 412 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 CD4P01730 458 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 GNAZP19086 355 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 CA4P22748 312 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 ATICP31939 592 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 SCNN1GP51170 649 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 SLC18A1P54219 525 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 GPS1Q13098 491 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 PLEKHA7Q6IQ23 1121 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 ZNF449Q6P9G9 518 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 EP400NLQ6ZTU2 488 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 NT5DC4Q86YG4 428 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 ZBED8Q8IZ13 594 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 RNF169Q8NCN4 708 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 C10orf82Q8WW14 230 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 SMC6Q96SB8 1091 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 TBC1D10AQ9BXI6 508 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 FOXP3Q9BZS1 431 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 RNPEPL1Q9HAU8 725 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 MRPL47Q9HD33 250 aaKnown RBP8.96□□□□□ -0.97
TRIM55-204ENST00000353317 OGDHLQ9ULD0 1010 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 DERAQ9Y315 318 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 NUMBLQ9Y6R0 609 aa8.96□□□□□ -0.97
TRIM55-204ENST00000353317 BANF1O75531 89 aa8.96□□□□□ -0.98
TRIM55-204ENST00000353317 CALB2P22676 271 aa8.96□□□□□ -0.98
TRIM55-204ENST00000353317 EPHB2P29323 1055 aa8.96□□□□□ -0.98
TRIM55-204ENST00000353317 BPIFB4P59827 614 aa8.96□□□□□ -0.98
TRIM55-204ENST00000353317 PTPN11Q06124 597 aaPredicted RBP8.96□□□□□ -0.98
TRIM55-204ENST00000353317 INCA1Q0VD86 236 aa8.96□□□□□ -0.98
TRIM55-204ENST00000353317 LIN9Q5TKA1 542 aa8.96□□□□□ -0.98
TRIM55-204ENST00000353317 MFSD7Q6UXD7 560 aa8.96□□□□□ -0.98
TRIM55-204ENST00000353317 CD300LGQ6UXG3 332 aa8.96□□□□□ -0.98
TRIM55-204ENST00000353317 MRPL10Q7Z7H8 261 aaKnown RBP8.96□□□□□ -0.98
TRIM55-204ENST00000353317 ALLCQ8N6M5 410 aa8.96□□□□□ -0.98
TRIM55-204ENST00000353317 LRRC8CQ8TDW0 803 aa8.96□□□□□ -0.98
TRIM55-204ENST00000353317 INPP5DQ92835 1189 aa8.96□□□□□ -0.98
TRIM55-204ENST00000353317 TTC25Q96NG3 672 aa8.96□□□□□ -0.98
TRIM55-204ENST00000353317 MAK16Q9BXY0 300 aaKnown RBP8.96□□□□□ -0.98
TRIM55-204ENST00000353317 VPS37BQ9H9H4 285 aa8.96□□□□□ -0.98
TRIM55-204ENST00000353317 SLC24A3Q9HC58 644 aa8.96□□□□□ -0.98
TRIM55-204ENST00000353317 CHST12Q9NRB3 414 aa8.96□□□□□ -0.98
TRIM55-204ENST00000353317 UBQLN1Q9UMX0 589 aaKnown RBP8.96□□□□□ -0.98
TRIM55-204ENST00000353317 SMG5Q9UPR3 1016 aaKnown RBP8.96□□□□□ -0.98
TRIM55-204ENST00000353317 TTC3P53804 2025 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 A0A0U1RQF3 1178 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 EIF4E1BA6NMX2 242 aaKnown RBP8.95□□□□□ -0.98
TRIM55-204ENST00000353317 GABBR2O75899 941 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 PIAS1O75925 651 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 DCTN3O75935 186 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 STAU1O95793 577 aaKnown RBP8.95□□□□□ -0.98
TRIM55-204ENST00000353317 POMCP01189 267 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 PFKMP08237 780 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 TPBGLP0DKB5 382 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 CLCNKBP51801 687 aa8.95□□□□□ -0.98
TRIM55-204ENST00000353317 LILRA4P59901 499 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms