RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 TREML1Q86YW5 311 aa18.71■□□□□ 0.59
CTSB-202ENST00000353047 FAM136AQ96C01 138 aa18.71■□□□□ 0.59
CTSB-202ENST00000353047 PLCH1Q4KWH8 1693 aa18.71■□□□□ 0.59
CTSB-202ENST00000353047 DCAF8L1A6NGE4 600 aa18.71■□□□□ 0.58
CTSB-202ENST00000353047 MTA2O94776 668 aa18.71■□□□□ 0.58
CTSB-202ENST00000353047 EGFRP00533 1210 aa18.71■□□□□ 0.58
CTSB-202ENST00000353047 KLF1Q13351 362 aaPredicted RBP18.71■□□□□ 0.58
CTSB-202ENST00000353047 GJC2Q5T442 439 aaPredicted RBP18.71■□□□□ 0.58
CTSB-202ENST00000353047 EEF1DP3Q658K8 133 aa18.71■□□□□ 0.58
CTSB-202ENST00000353047 TRIM42Q8IWZ5 723 aa18.71■□□□□ 0.58
CTSB-202ENST00000353047 RYBPQ8N488 228 aaPredicted RBP18.71■□□□□ 0.58
CTSB-202ENST00000353047 CNKSR2Q8WXI2 1034 aa18.71■□□□□ 0.58
CTSB-202ENST00000353047 LPIN3Q9BQK8 851 aa18.71■□□□□ 0.58
CTSB-202ENST00000353047 VCX3AQ9NNX9 186 aa18.71■□□□□ 0.58
CTSB-202ENST00000353047 BCORQ6W2J9 1755 aa18.7■□□□□ 0.58
CTSB-202ENST00000353047 ERVK-10P10266 1014 aa18.7■□□□□ 0.58
CTSB-202ENST00000353047 PDCD2Q16342 344 aaPredicted RBP18.7■□□□□ 0.58
CTSB-202ENST00000353047 HPS6Q86YV9 775 aa18.7■□□□□ 0.58
CTSB-202ENST00000353047 TMEM192Q8IY95 271 aa18.7■□□□□ 0.58
CTSB-202ENST00000353047 SPATA6LQ8N4H0 392 aa18.7■□□□□ 0.58
CTSB-202ENST00000353047 RNF169Q8NCN4 708 aa18.7■□□□□ 0.58
CTSB-202ENST00000353047 FOXP3Q9BZS1 431 aa18.7■□□□□ 0.58
CTSB-202ENST00000353047 CCDC189A1A4V9 331 aa18.7■□□□□ 0.58
CTSB-202ENST00000353047 COPAP53621 1224 aa18.7■□□□□ 0.58
CTSB-202ENST00000353047 CIAPIN1Q6FI81 312 aa18.7■□□□□ 0.58
CTSB-202ENST00000353047 TMPRSS6Q8IU80 811 aa18.7■□□□□ 0.58
CTSB-202ENST00000353047 TAGLN3Q9UI15 199 aa18.7■□□□□ 0.58
CTSB-202ENST00000353047 ACTL7BQ9Y614 415 aa18.7■□□□□ 0.58
CTSB-202ENST00000353047 USP54Q70EL1 1684 aa18.7■□□□□ 0.58
CTSB-202ENST00000353047 MYOCOSA0A1B0GUC4 107 aa18.7■□□□□ 0.58
CTSB-202ENST00000353047 TM9SF1O15321 606 aa18.7■□□□□ 0.58
CTSB-202ENST00000353047 RAG1P15918 1043 aa18.7■□□□□ 0.58
CTSB-202ENST00000353047 ACADSP16219 412 aa18.7■□□□□ 0.58
CTSB-202ENST00000353047 OLIG2Q13516 323 aa18.7■□□□□ 0.58
CTSB-202ENST00000353047 TRPC5Q9UL62 973 aaPredicted RBP18.7■□□□□ 0.58
CTSB-202ENST00000353047 CYP1A1P04798 512 aaPredicted RBP18.69■□□□□ 0.58
CTSB-202ENST00000353047 GPD1P21695 349 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 FGFR3P22607 806 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 ARL4AP40617 200 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 CCNFP41002 786 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 SKIV2L2P42285 1042 aaKnown RBP18.69■□□□□ 0.58
CTSB-202ENST00000353047 CASP2P42575 452 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 MCL1Q07820 350 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 SNX31Q8N9S9 440 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 SHKBP1Q8TBC3 707 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 RNF217Q8TC41 542 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 NDRG1Q92597 394 aaKnown RBP18.69■□□□□ 0.58
CTSB-202ENST00000353047 KIF12Q96FN5 646 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 TUBGCP5Q96RT8 1024 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 ACAD9Q9H845 621 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 RSAD1Q9HA92 442 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 IL1RL2Q9HB29 575 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 VWA5AO00534 786 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 PRPF4O43172 522 aaKnown RBP eCLIP18.69■□□□□ 0.581e-12■■■■□ 20.3
CTSB-202ENST00000353047 SLC4A1P02730 911 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 GCAP28676 217 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 ATF7IP2Q5U623 682 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 IRGCQ6NXR0 463 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 MPP5Q8N3R9 675 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 GDPD5Q8WTR4 605 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 ZNF333Q96JL9 665 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 MED10Q9BTT4 135 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 DEFB129Q9H1M3 183 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 GTSE1Q9NYZ3 720 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 ZNRF3Q9ULT6 936 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 MRPS22P82650 360 aaKnown RBP18.69■□□□□ 0.58
CTSB-202ENST00000353047 ZNF669Q96BR6 464 aaPredicted RBP18.69■□□□□ 0.58
CTSB-202ENST00000353047 CDHR1Q96JP9 859 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 PHACTR1Q9C0D0 580 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 RPS6KL1Q9Y6S9 549 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 ANKRD12Q6UB98 2062 aa18.69■□□□□ 0.58
CTSB-202ENST00000353047 GOLGA4Q13439 2230 aaKnown RBP18.68■□□□□ 0.58
CTSB-202ENST00000353047 ERBB2P04626 1255 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 SUPT20HL2P0C7V6 817 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 NME5P56597 212 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 CAPSQ13938 189 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 SUPT20HL1Q3ZLR7 823 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 FAM160B1Q5W0V3 765 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 VSIG10LQ86VR7 867 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 B4GALNT2Q8NHY0 566 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 HIC2Q96JB3 615 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 SUPT3HO75486 399 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 STAMBPO95630 424 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 VTNP04004 478 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 NFICP08651 508 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 ABHD2P08910 425 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 ACVR2BQ13705 512 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 SEPT6Q14141 434 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 EFHC2Q5JST6 749 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 PHF13Q86YI8 300 aaPredicted RBP18.68■□□□□ 0.58
CTSB-202ENST00000353047 STKLD1Q8NE28 680 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 COPS5Q92905 334 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 EBF3Q9H4W6 596 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 SAR1AQ9NR31 198 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 KDM4FA0A1W2PPD8 638 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 P4HA1P13674 534 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 PTPN11Q06124 597 aaPredicted RBP18.68■□□□□ 0.58
CTSB-202ENST00000353047 GOLGA7BQ2TAP0 167 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 TRIML2Q8N7C3 387 aa18.68■□□□□ 0.58
CTSB-202ENST00000353047 BANPQ8N9N5 519 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms