RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 PCDH9Q9HC56 1237 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 RRN3Q9NYV6 651 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 NINQ8N4C6 2090 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 RHOBTB1O94844 696 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 ABCB1P08183 1280 aaPredicted RBP8.27□□□□□ -1.09
TNPO1-201ENST00000337273 FAM153BP0C7A2 387 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 AKT1P31749 480 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 MYL6P60660 151 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 SFSWAPQ12872 951 aaKnown RBP8.27□□□□□ -1.09
TNPO1-201ENST00000337273 TOP3AQ13472 1001 aaPredicted RBP8.27□□□□□ -1.09
TNPO1-201ENST00000337273 FAM153CQ494X1 144 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 FAM98BQ52LJ0 330 aaKnown RBP8.27□□□□□ -1.09
TNPO1-201ENST00000337273 FAXCQ5TGI0 409 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 GPAT2Q6NUI2 795 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 MBD2Q9UBB5 411 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 TRDMT1O14717 391 aaKnown RBP8.27□□□□□ -1.09
TNPO1-201ENST00000337273 C11orf88Q6PI97 169 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 MARK4Q96L34 752 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 EMILIN2Q9BXX0 1053 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 SLC7A5P2Q9GIP4 190 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 ARMC7Q9H6L4 198 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 RGL1Q9NZL6 768 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 TTLL13PA6NNM8 815 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 CSF1RP07333 972 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 NAMPTP43490 491 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 CCT8P50990 548 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 GPR162Q16538 588 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.27□□□□□ -1.09
TNPO1-201ENST00000337273 FAM45AQ8TCE6 357 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 C9orf16Q9BUW7 83 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 THAP2Q9H0W7 228 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 HEATR9A2RTY3 570 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 ASNA1O43681 348 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 ATP9AO75110 1047 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 CRTAMO95727 393 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 MYL4P12829 197 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 PRKAA1Q13131 559 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 NFYCQ13952 458 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 SDE2Q6IQ49 451 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 C7orf57Q8NEG2 295 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 CERKQ8TCT0 537 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 WDR60Q8WVS4 1066 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 STN1Q9H668 368 aaKnown RBP8.27□□□□□ -1.09
TNPO1-201ENST00000337273 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.27□□□□□ -1.093e-7■■■■□ 21.8
TNPO1-201ENST00000337273 DSEQ9UL01 958 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 CLCA2Q9UQC9 943 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 RUVBL2Q9Y230 463 aaKnown RBP8.27□□□□□ -1.09
TNPO1-201ENST00000337273 MYRFQ9Y2G1 1151 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 AK5Q9Y6K8 562 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 SF3B1O75533 1304 aaKnown RBP eCLIP8.27□□□□□ -1.096e-7■■■■■ 71.8
TNPO1-201ENST00000337273 DLC1Q96QB1 1528 aa8.27□□□□□ -1.09
TNPO1-201ENST00000337273 TMEM114B3SHH9 223 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 CHRM3P20309 590 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 ARHGAP17Q68EM7 881 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 LPCAT2Q7L5N7 544 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 SLC20A1Q8WUM9 679 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 LRRC39Q96DD0 335 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 CRAMP1Q96RY5 1269 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 WDCPQ9H6R7 721 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 KBTBD4Q9NVX7 518 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 PIN4Q9Y237 131 aaKnown RBP8.26□□□□□ -1.09
TNPO1-201ENST00000337273 RPS6KL1Q9Y6S9 549 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 MYH11P35749 1972 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 F8W810 466 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 KRT6BP04259 564 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 KRT6CP48668 564 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 SARSP49591 514 aaKnown RBP8.26□□□□□ -1.09
TNPO1-201ENST00000337273 KPNA1P52294 538 aaPredicted RBP8.26□□□□□ -1.09
TNPO1-201ENST00000337273 EMC2Q15006 297 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 DDR2Q16832 855 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 KRT78Q8N1N4 520 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 KYQ8NBH2 561 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 CYP39A1Q9NYL5 469 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 ERAP1Q9NZ08 941 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 SNX13Q9Y5W8 968 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 ATXN2Q99700 1313 aaKnown RBP8.26□□□□□ -1.09
TNPO1-201ENST00000337273 VPS26AO75436 327 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 PTPN7P35236 360 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 PPP3CCP48454 512 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 NR2C2P49116 596 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 ACOT2P49753 483 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 PRKCQQ04759 706 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 CLEC16AQ2KHT3 1053 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 SMTNL2Q2TAL5 461 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 KLHL12Q53G59 568 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 ATF7IP2Q5U623 682 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 ZBTB49Q6ZSB9 765 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.26□□□□□ -1.09
TNPO1-201ENST00000337273 SEMA6AQ9H2E6 1030 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 RNF112Q9ULX5 631 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 HPS5Q9UPZ3 1129 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 AFF2P51816 1311 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 H3BMM5 538 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 DNALI1O14645 258 aaPredicted RBP8.26□□□□□ -1.09
TNPO1-201ENST00000337273 TPBGLP0DKB5 382 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 VDRP11473 427 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 GSTA3Q16772 222 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 CCDC81Q6ZN84 652 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 ATG9AQ7Z3C6 839 aa8.26□□□□□ -1.09
TNPO1-201ENST00000337273 SNX31Q8N9S9 440 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms