RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 TMEM120AQ9BXJ8 343 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 KRT82Q9NSB4 513 aa17.9■□□□□ 0.46
SCAMP4-201ENST00000316097 TSPAN1O60635 241 aa17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 RNF8O76064 485 aa17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 F2P00734 622 aa17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 SSTR1P30872 391 aa17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 DUOXA2Q1HG44 320 aa17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 MON1BQ7L1V2 547 aa17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 TTC7BQ86TV6 843 aa17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 GBP5Q96PP8 586 aa17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 ZNF184Q99676 751 aaPredicted RBP17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 DDX50Q9BQ39 737 aaKnown RBP17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 HES2Q9Y543 173 aa17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 CPA2P48052 419 aa17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 ERFP50548 548 aa17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 CDK16Q00536 496 aa17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 SREBF2Q12772 1141 aa17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 CCDC142Q17RM4 750 aa17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 RNASEH2BQ5TBB1 312 aaKnown RBP17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 SKA1Q96BD8 255 aa17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 GORASP1Q9BQQ3 440 aa17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 RPF1Q9H9Y2 349 aaKnown RBP17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 SSU72Q9NP77 194 aaKnown RBP17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 NXF1Q9UBU9 619 aaKnown RBP17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 RABGEF1Q9UJ41 708 aa17.89■□□□□ 0.45
SCAMP4-201ENST00000316097 ZC3H11AO75152 810 aaKnown RBP eCLIP17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 PGK1P00558 417 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 C6orf222P0C671 652 aaPredicted RBP17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 TMEM191BP0C7N4 346 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 CYP2C9P11712 490 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 TCF4P15884 667 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 AMPD1P23109 780 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 GAD2Q05329 585 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 MTM1Q13496 603 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 LAMB3Q13751 1172 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 PDCD2Q16342 344 aaPredicted RBP17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 SLC5A9Q2M3M2 681 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 LIN9Q5TKA1 542 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 TRIB2Q92519 343 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 PAFAH2Q99487 392 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 NFKBIZQ9BYH8 718 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 PPCSQ9HAB8 311 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 ZNF212Q9UDV6 495 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 CLUHO75153 1309 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 COL1A2P08123 1366 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 ZSWIM8A7E2V4 1837 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 TLR3O15455 904 aaKnown RBP17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 CA12O43570 354 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 ZCCHC18P0CG32 403 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 TM4SF4P48230 202 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 FLT3LGP49771 235 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 NEK3P51956 506 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 MAMLD1Q13495 774 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 RASA2Q15283 850 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 JADE1Q6IE81 842 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 MFSD7Q6UXD7 560 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 TMEM40Q8WWA1 233 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 AP5M1Q9H0R1 490 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 PCMTD2Q9NV79 361 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 ARMCX1Q9P291 453 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 POLIQ9UNA4 740 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 PCDHB2Q9Y5E7 798 aa17.88■□□□□ 0.45
SCAMP4-201ENST00000316097 TMEM88BA6NKF7 163 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 KRT1P04264 644 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 PGM1P36871 562 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 TRPC3Q13507 836 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 CUL3Q13618 768 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 HIF1AQ16665 826 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 NBPF20Q3BBV1 942 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 FAM161BQ96MY7 647 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 VPS11Q9H270 941 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 ADAMTS10Q9H324 1103 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 KCNK13Q9HB14 408 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 TM9SF1O15321 606 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 GPR32O75388 356 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 ASS1P00966 412 aaKnown RBP17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 RAP1GAPP47736 663 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 PSEN2P49810 448 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 PLCB3Q01970 1234 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 ENPEPQ07075 957 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 ORC1Q13415 861 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 FSCN1Q16658 493 aaKnown RBP17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 SLC10A6Q3KNW5 377 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 WDR72Q3MJ13 1102 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 PYROXD1Q8WU10 500 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 TMEM121Q9BTD3 319 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 SHOC2Q9UQ13 582 aa17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 MTO1Q9Y2Z2 717 aaKnown RBP17.87■□□□□ 0.45
SCAMP4-201ENST00000316097 NRCAMQ92823 1304 aa17.86■□□□□ 0.45
SCAMP4-201ENST00000316097 SGK1O00141 431 aa17.86■□□□□ 0.45
SCAMP4-201ENST00000316097 DNAJC6O75061 913 aa17.86■□□□□ 0.45
SCAMP4-201ENST00000316097 CYP1A1P04798 512 aaPredicted RBP17.86■□□□□ 0.45
SCAMP4-201ENST00000316097 CDH8P55286 799 aa17.86■□□□□ 0.45
SCAMP4-201ENST00000316097 PRKCZQ05513 592 aa17.86■□□□□ 0.45
SCAMP4-201ENST00000316097 TAB3Q8N5C8 712 aaPredicted RBP17.86■□□□□ 0.45
SCAMP4-201ENST00000316097 BANPQ8N9N5 519 aa17.86■□□□□ 0.45
SCAMP4-201ENST00000316097 ACSF2Q96CM8 615 aaPredicted RBP17.86■□□□□ 0.45
SCAMP4-201ENST00000316097 SLITRK1Q96PX8 696 aa17.86■□□□□ 0.45
SCAMP4-201ENST00000316097 MMADHCQ9H3L0 296 aaPredicted RBP17.86■□□□□ 0.45
SCAMP4-201ENST00000316097 PDP2Q9P2J9 529 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms