RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 KLRC3Q07444 240 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 GTF2H3Q13889 308 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 CLEC16AQ2KHT3 1053 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 INO80DQ53TQ3 878 aaPredicted RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 RASSF3Q86WH2 238 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 CYP4Z2PQ8N1L4 340 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 SPATA20Q8TB22 786 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 EVA1AQ9H8M9 152 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 A0A087WZ62 844 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 MEI4A8MW99 385 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 HNRNPCL2B2RXH8 293 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 MATN2O00339 956 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 ZNF333Q96JL9 665 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 ELOVL4Q9GZR5 314 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 PIGUQ9H490 435 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 LZTS1Q9Y250 596 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 A0A087WXM4 84 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 GPR75-ASB3A0A0A6YYF3 556 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 REM1O75628 298 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 PGK2P07205 417 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 MYL2P10916 166 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 ZNF268Q14587 947 aaPredicted RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 GRAMD1BQ3KR37 738 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 PIGOQ8TEQ8 1089 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 PGBD1Q96JS3 809 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 ZNF512Q96ME7 567 aaPredicted RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 ENTPD7Q9NQZ7 604 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 KCNH7Q9NS40 1196 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 PSME2Q9UL46 239 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 MINPP1Q9UNW1 487 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 MRPS14O60783 128 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 WDR47O94967 919 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 CYP11B1P15538 503 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 GUCA1AP43080 201 aaPredicted RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 DNA2P51530 1060 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 TUBA3CQ13748 450 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 KYNUQ16719 465 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 HIST2H2ACQ16777 129 aaPredicted RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 BMT2Q1RMZ1 405 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 SEL1L3Q68CR1 1132 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 RNF43Q68DV7 783 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 HIST2H2AA3Q6FI13 130 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 DNAAF5Q86Y56 855 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 LENG9Q96B70 501 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 DCUN1D1Q96GG9 259 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 FAM84AQ96KN4 292 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 ZNF184Q99676 751 aaPredicted RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 SPAG4Q9NPE6 437 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 LRRC53A6NM62 1247 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 GRIN3BO60391 1043 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 CFL1P23528 166 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 DCKP27707 260 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 TMEM132BQ14DG7 1078 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 R3HCC1LQ7Z5L2 792 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 MIER2Q8N344 545 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 EIF2B3Q9NR50 452 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 PCDHA6Q9UN73 950 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 PCDHA8Q9Y5H6 950 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 AKT1P31749 480 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 EPHB1P54762 984 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 TPI1P60174 286 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 TFAMQ00059 246 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 USH1GQ495M9 461 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 NFRKBQ6P4R8 1299 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 C3orf62Q6ZUJ4 267 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 KAT2BQ92831 832 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 BTBD9Q96Q07 612 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 KLHL28Q9NXS3 571 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 PRDM4Q9UKN5 801 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 L1RE1Q9UN81 338 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 SNX7Q9UNH6 387 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 F8W031 263 aaPredicted RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 ETV6P41212 452 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 PMS1P54277 932 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 ZNF543Q08ER8 600 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 CCDC157Q569K6 752 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 XKRXQ6PP77 449 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 STRA8Q7Z7C7 330 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 LRRC34Q8IZ02 419 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 FAM212AQ96EL1 285 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 TMEM109Q9BVC6 243 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 UBQLN1Q9UMX0 589 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 SIPA1L3O60292 1781 aaPredicted RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 TRIM24O15164 1050 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 ASGR1P07306 291 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 CTPS1P17812 591 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 ENDOUP21128 410 aaKnown RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 TUBA1BP68363 451 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 TXNRD1Q16881 649 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 TUBA1AQ71U36 451 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 GLB1L3Q8NCI6 653 aaPredicted RBP4.14□□□□□ -1.75
USH2A-201ENST00000307340 TMEM134Q9H6X4 195 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 A0A0A0MRY4 1105 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 TMEM110-MUSTN1A8MSY1 372 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 POC1B-GALNT4F8VUJ3 575 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 GCATO75600 419 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 EPN2O95208 641 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 PIK3CBP42338 1070 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 SPANXN2Q5MJ10 180 aa4.14□□□□□ -1.75
USH2A-201ENST00000307340 CDKAL1Q5VV42 579 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms