RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 SGO2Q562F6 1265 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 RAB41Q5JT25 222 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 CCDC186Q7Z3E2 898 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 IRF2BP1Q8IU81 584 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 BBS7Q8IWZ6 715 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 PPM1KQ8N3J5 372 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 EHBP1Q8NDI1 1231 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 TFAP2BQ92481 460 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 HHIPQ96QV1 700 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 ZSWIM1Q9BR11 485 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 UBXN6Q9BZV1 441 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 DNAI2Q9GZS0 605 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 LMBRD1Q9NUN5 540 aa15.19■□□□□ 0.02
HMGN3-201ENST00000275036 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.19■□□□□ 0.02
HMGN3-201ENST00000275036 LAMA1P25391 3075 aa15.18■□□□□ 0.02
HMGN3-201ENST00000275036 O00370 1275 aa15.18■□□□□ 0.02
HMGN3-201ENST00000275036 SLC9A3R1O14745 358 aaPredicted RBP15.18■□□□□ 0.02
HMGN3-201ENST00000275036 VDRP11473 427 aa15.18■□□□□ 0.02
HMGN3-201ENST00000275036 CD19P15391 556 aa15.18■□□□□ 0.02
HMGN3-201ENST00000275036 ATP5C1P36542 298 aaKnown RBP15.18■□□□□ 0.02
HMGN3-201ENST00000275036 SEC13P55735 322 aa15.18■□□□□ 0.02
HMGN3-201ENST00000275036 YWHAEP62258 255 aaKnown RBP15.18■□□□□ 0.02
HMGN3-201ENST00000275036 PDE4CQ08493 712 aa15.18■□□□□ 0.02
HMGN3-201ENST00000275036 FBXO43Q4G163 708 aa15.18■□□□□ 0.02
HMGN3-201ENST00000275036 PKDCCQ504Y2 493 aa15.18■□□□□ 0.02
HMGN3-201ENST00000275036 LY6G5CQ5SRR4 150 aa15.18■□□□□ 0.02
HMGN3-201ENST00000275036 LAIR1Q6GTX8 287 aa15.18■□□□□ 0.02
HMGN3-201ENST00000275036 TMEM270Q6UE05 265 aa15.18■□□□□ 0.02
HMGN3-201ENST00000275036 RRAGAQ7L523 313 aa15.18■□□□□ 0.02
HMGN3-201ENST00000275036 PHTF2Q8N3S3 785 aa15.18■□□□□ 0.02
HMGN3-201ENST00000275036 USP33Q8TEY7 942 aa15.18■□□□□ 0.02
HMGN3-201ENST00000275036 CNOT6LQ96LI5 555 aaKnown RBP15.18■□□□□ 0.02
HMGN3-201ENST00000275036 KREMEN1Q96MU8 473 aa15.18■□□□□ 0.02
HMGN3-201ENST00000275036 NACA2Q9H009 215 aa15.18■□□□□ 0.02
HMGN3-201ENST00000275036 NAGPAQ9UK23 515 aa15.18■□□□□ 0.02
HMGN3-201ENST00000275036 SLC8A2Q9UPR5 921 aa15.18■□□□□ 0.02
HMGN3-201ENST00000275036 SH3BP1Q9Y3L3 701 aa15.18■□□□□ 0.02
HMGN3-201ENST00000275036 ATG13O75143 517 aa15.17■□□□□ 0.02
HMGN3-201ENST00000275036 CCDC192P0DO97 292 aa15.17■□□□□ 0.02
HMGN3-201ENST00000275036 HNRNPLP14866 589 aaKnown RBP eCLIP15.17■□□□□ 0.02
HMGN3-201ENST00000275036 TKTL1P51854 596 aa15.17■□□□□ 0.02
HMGN3-201ENST00000275036 BCAT1P54687 386 aa15.17■□□□□ 0.02
HMGN3-201ENST00000275036 SPEM2Q0P670 501 aa15.17■□□□□ 0.02
HMGN3-201ENST00000275036 CETN1Q12798 172 aa15.17■□□□□ 0.02
HMGN3-201ENST00000275036 DMC1Q14565 340 aa15.17■□□□□ 0.02
HMGN3-201ENST00000275036 DPCR1Q3MIW9 517 aa15.17■□□□□ 0.02
HMGN3-201ENST00000275036 SYT13Q7L8C5 426 aa15.17■□□□□ 0.02
HMGN3-201ENST00000275036 BHLHA9Q7RTU4 235 aa15.17■□□□□ 0.02
HMGN3-201ENST00000275036 FAM160A2Q8N612 972 aaPredicted RBP15.17■□□□□ 0.02
HMGN3-201ENST00000275036 MLKLQ8NB16 471 aa15.17■□□□□ 0.02
HMGN3-201ENST00000275036 UBA3Q8TBC4 463 aa15.17■□□□□ 0.02
HMGN3-201ENST00000275036 NDRG1Q92597 394 aaKnown RBP15.17■□□□□ 0.02
HMGN3-201ENST00000275036 P2RY11Q96G91 374 aa15.17■□□□□ 0.02
HMGN3-201ENST00000275036 INTS2Q9H0H0 1204 aaKnown RBP15.17■□□□□ 0.02
HMGN3-201ENST00000275036 TBC1D14Q9P2M4 693 aa15.17■□□□□ 0.02
HMGN3-201ENST00000275036 PCDHB4Q9Y5E5 795 aa15.17■□□□□ 0.02
HMGN3-201ENST00000275036 XPO1O14980 1071 aaKnown RBP15.16■□□□□ 0.02
HMGN3-201ENST00000275036 GABBR2O75899 941 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 FGFR1OPO95684 399 aaKnown RBP15.16■□□□□ 0.02
HMGN3-201ENST00000275036 PAEPP09466 180 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 ADH5P11766 374 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 CNR2P34972 360 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 PSEN1P49768 467 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 ZNF132P52740 706 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 GCNT1Q02742 428 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 KDSRQ06136 332 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 BST2Q10589 180 aaKnown RBP15.16■□□□□ 0.02
HMGN3-201ENST00000275036 RSPO4Q2I0M5 234 aaPredicted RBP15.16■□□□□ 0.02
HMGN3-201ENST00000275036 C2orf27AQ580R0 203 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 C10orf120Q5SQS8 335 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 KLHDC10Q6PID8 442 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 HTR3DQ70Z44 454 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 TMEM25Q86YD3 366 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 ETFBKMTQ8IXQ9 262 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 ZNF276Q8N554 614 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 GAB3Q8WWW8 586 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 OTUB2Q96DC9 234 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 ULBP1Q9BZM6 244 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 NUP62CLQ9H1M0 184 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 ZDHHC4Q9NPG8 344 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 DLL3Q9NYJ7 618 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 CLIC5Q9NZA1 410 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 DNMT3LQ9UJW3 386 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 GMEB2Q9UKD1 530 aa15.16■□□□□ 0.02
HMGN3-201ENST00000275036 CCDC163A0A0D9SF12 145 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 TRIM24O15164 1050 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 KAT7O95251 611 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 ADH1CP00326 375 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 RETP07949 1114 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 BRD2P25440 801 aaKnown RBP15.15■□□□□ 0.02
HMGN3-201ENST00000275036 PLA2G4AP47712 749 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 APBA1Q02410 837 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 EMC10Q5UCC4 262 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 PM20D1Q6GTS8 502 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 GJB7Q6PEY0 223 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 LCLAT1Q6UWP7 414 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.15■□□□□ 0.02
HMGN3-201ENST00000275036 KBTBD6Q86V97 674 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 CREBRFQ8IUR6 639 aa15.15■□□□□ 0.02
HMGN3-201ENST00000275036 ABCA7Q8IZY2 2146 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms