RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Npas2P97460 816 aa9.5□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 9130409I23RikQ3TS87 320 aa9.5□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Erich4Q3UNU4 136 aa9.5□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Armcx2Q6A058 784 aaKnown RBP9.5□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Sh3tc2Q80VA5 1289 aa9.5□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Csnk1g1Q8BTH8 459 aa9.5□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Kcnv1Q8BZN2 503 aa9.5□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Pnpt1Q8K1R3 783 aaKnown RBP9.5□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Fcho1Q8K285 873 aa9.5□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 MyocdQ8VIM5 935 aa9.5□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Pomgnt1Q91X88 660 aa9.5□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Lpgat1Q91YX5 370 aa9.5□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Entpd5Q9WUZ9 427 aa9.5□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Snx1Q9WV80 522 aa9.5□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Zbtb12Q9Z150 459 aa9.5□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Gm5538W4VSP6 401 aa9.5□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 9330159F19RikD3Z623 648 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Psma3O70435 255 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 EgfP01132 1217 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Sesn2P58043 480 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Hnrnph2P70333 449 aaKnown RBP9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Pde1bQ01065 535 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 OsbpQ3B7Z2 805 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Plcl1Q3USB7 1096 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Gm14685Q52KH6 695 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 StilQ60988 1262 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Scube3Q66PY1 993 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Chsy1Q6ZQ11 800 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 ItpkcQ7TS72 678 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Prpf39Q8K2Z2 665 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Gle1Q8R322 699 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Dnajc28Q8VCE1 385 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Stap1Q9JM90 297 aaKnown RBP9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Wnt8bQ9WUD6 350 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Nlrc5C3VPR6 1915 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Sh3pxd2bA2AAY5 908 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Gm281D3Z1Y0 860 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Krt8P11679 490 aaKnown RBP9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Sox8Q04886 464 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Zbtb8osQ505B7 168 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 CochQ62507 552 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Arhgap10Q6Y5D8 786 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Eif2aQ8BJW6 581 aaKnown RBP9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Champ1Q8K327 802 aaKnown RBP9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Iqsec1Q8R0S2 961 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Snap47Q8R570 413 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Sh3d19Q91X43 789 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Xpo7Q9EPK7 1087 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Top3bQ9Z321 862 aaKnown RBP9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Bfsp1A2AMT1 669 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Zfp212G3X8R7 492 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Il3P01586 166 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 AlbP07724 608 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Sstr1P30873 391 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Tex35Q14BK3 207 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Ndst1Q3UHN9 882 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Sec23ipQ6NZC7 998 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Cplx4Q80WM3 160 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Abcf3Q8K268 709 aa9.49□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Nup62clA2AG10 272 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Il12aP43431 215 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 TraddQ3U0V2 310 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 FaxcQ3UMF9 409 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 AcdQ5EE38 416 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Foxn1Q61575 648 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Tpp2Q64514 1262 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Olfr389Q7TRX7 312 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Cep104Q80V31 926 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Mis18bp1Q80WQ8 998 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Kat14Q8CID0 779 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Zmiz2Q8CIE2 920 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Smyd2Q8R5A0 433 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 PlvapQ91VC4 438 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Tm4sf4Q91XD3 202 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Mrps17Q9CQE3 120 aaKnown RBP9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Arl2Q9D0J4 184 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Ddx21Q9JIK5 851 aaKnown RBP9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 AuhQ9JLZ3 314 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Fbxo16Q9QZM9 334 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 MycsQ9Z304 431 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Gm5160F8VPN3 147 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Serpinb9O08797 374 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Cldn5O54942 218 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 P01670 111 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 P01671 111 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 P01672 111 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Ccnb1P24860 430 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Gbp8Q2V6D6 525 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Cd163Q2VLH6 1121 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Gm29609Q3UU56 907 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Rxfp1Q6R6I7 758 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 PhkbQ7TSH2 1085 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Nacc1Q7TSZ8 514 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Gtf3c2Q8BL74 907 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Neto2Q8BNJ6 525 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Cabs1Q8C633 391 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Fam160b1Q8CDM8 764 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Unc45bQ8CGY6 931 aaKnown RBP9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Lrrc14Q8VC16 493 aa9.48□□□□□ -0.89
Ctnna1-201ENSMUST00000042345 Tm9sf1Q9DBU0 606 aa9.48□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms