RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 YOL166W-AQ8TGJ1 51 aa-4.8□□□□□ -3.18
snR48snR48 YOL131WQ08270 108 aa-4.81□□□□□ -3.18
snR48snR48 IML1P47170 1584 aa-4.84□□□□□ -3.18
snR48snR48 ESC1Q03661 1658 aaKnown RBP-4.86□□□□□ -3.19
snR48snR48 FLO1P32768 1537 aa-4.87□□□□□ -3.19
snR48snR48 RPO31P04051 1460 aa-4.88□□□□□ -3.19
snR48snR48 UFD4P33202 1483 aa-4.88□□□□□ -3.19
snR48snR48 YMR105W-AQ8TGS8 64 aa-4.9□□□□□ -3.19
snR48snR48 VMR1P38735 1592 aa-4.95□□□□□ -3.2
snR48snR48 PDR5P33302 1511 aaKnown RBP-4.96□□□□□ -3.2
snR48snR48 YSY6P38374 65 aa-4.98□□□□□ -3.21
snR48snR48 TCB3Q03640 1545 aaKnown RBP-5.02□□□□□ -3.21
snR48snR48 YFL041W-AQ3E817 63 aa-5.05□□□□□ -3.22
snR48snR48 DOP1Q03921 1698 aa-5.09□□□□□ -3.22
snR48snR48 SSK2P53599 1579 aa-5.1□□□□□ -3.23
snR48snR48 YCF1P39109 1515 aaKnown RBP-5.16□□□□□ -3.24
snR48snR48 YHR073W-AP0C5N7 58 aa-5.19□□□□□ -3.24
snR48snR48 YHR213W-AQ8TGT4 77 aa-5.22□□□□□ -3.25
snR48snR48 YPR010C-AA5Z2X5 72 aa-5.23□□□□□ -3.25
snR48snR48 YIL102C-AQ2V2P5 75 aa-5.25□□□□□ -3.25
snR48snR48 SCC2Q04002 1493 aa-5.28□□□□□ -3.25
snR48snR48 VPS13Q07878 3144 aa-5.3□□□□□ -3.26
snR48snR48 NUP159P40477 1460 aa-5.34□□□□□ -3.26
snR48snR48 YJL133C-AQ3E7A3 74 aa-5.38□□□□□ -3.27
snR48snR48 ULS1Q08562 1619 aa-5.38□□□□□ -3.27
snR48snR48 NUP188P52593 1655 aaKnown RBP-5.39□□□□□ -3.27
snR48snR48 YBT1P32386 1661 aa-5.4□□□□□ -3.27
snR48snR48 PAI3P01094 68 aa-5.47□□□□□ -3.29
snR48snR48 GCN2P15442 1659 aa-5.5□□□□□ -3.29
snR48snR48 STU1P38198 1513 aa-5.54□□□□□ -3.3
snR48snR48 DDR2P89113 61 aa-5.56□□□□□ -3.3
snR48snR48 CDC25P04821 1589 aa-5.57□□□□□ -3.3
snR48snR48 MYO4P32492 1471 aa-5.59□□□□□ -3.3
snR48snR48 ATG2P53855 1592 aa-5.63□□□□□ -3.31
snR48snR48 COX9P07255 59 aa-5.66□□□□□ -3.32
snR48snR48 BUD3P25558 1636 aa-5.73□□□□□ -3.33
snR48snR48 YKL023C-AQ2V2P3 75 aa-5.87□□□□□ -3.35
snR48snR48 SKI3P17883 1432 aaKnown RBP-5.91□□□□□ -3.36
snR48snR48 VMA9Q3E7B6 73 aa-5.94□□□□□ -3.36
snR48snR48 NUP170P38181 1502 aa-5.94□□□□□ -3.36
snR48snR48 YLR342W-AQ3E810 57 aa-5.95□□□□□ -3.36
snR48snR48 HIR3P47171 1648 aa-6.1□□□□□ -3.39
snR48snR48 YJL127C-BQ3E828 52 aa-6.13□□□□□ -3.39
snR48snR48 PEP1P32319 1579 aa-6.14□□□□□ -3.39
snR48snR48 NUP192P47054 1683 aa-6.25□□□□□ -3.41
snR48snR48 YLL066W-BQ8TGJ7 56 aa-6.28□□□□□ -3.41
snR48snR48 PMP3P87284 55 aa-6.29□□□□□ -3.42
snR48snR48 USO1P25386 1790 aa-6.41□□□□□ -3.44
snR48snR48 YFR010W-AP0C5N0 62 aa-6.47□□□□□ -3.45
snR48snR48 SMX2P40204 77 aaKnown RBP-6.49□□□□□ -3.45
snR48snR48 TOM1Q03280 3268 aa-6.58□□□□□ -3.46
snR48snR48 RKR1Q04781 1562 aa-6.63□□□□□ -3.47
snR48snR48 HOR7Q05827 59 aa-6.66□□□□□ -3.48
snR48snR48 SPT6P23615 1451 aaKnown RBP-6.71□□□□□ -3.48
snR48snR48 MON2P48563 1636 aaPredicted RBP-6.75□□□□□ -3.49
snR48snR48 CHC1P22137 1653 aaKnown RBP-6.99□□□□□ -3.53
snR48snR48 MLP2P40457 1679 aa-7.11□□□□□ -3.55
snR48snR48 TOM7P53507 60 aa-7.16□□□□□ -3.56
snR48snR48 NCE101Q02820 53 aa-7.86□□□□□ -3.67
snR48snR48 RPL39P04650 51 aa-8.56□□□□□ -3.78
snR48snR48 Q0297Q9ZZV8 51 aa-8.75□□□□□ -3.81
snR48snR48 YIL046W-AQ3E7Z4 54 aa-9.42□□□□□ -3.92
snR48snR48 YDR034W-BQ6Q5X2 51 aa-11.19□□□□□ -4.2
Retrieved 63 of 5,963 RNA–protein pairs in 10 ms