RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A YDR034C-AP0C289 58 aa-2.34□□□□□ -2.78
SDH6YDR379C-A UFD4P33202 1483 aa-2.38□□□□□ -2.79
SDH6YDR379C-A YOL166W-AQ8TGJ1 51 aa-2.39□□□□□ -2.79
SDH6YDR379C-A RPO31P04051 1460 aa-2.39□□□□□ -2.79
SDH6YDR379C-A BCK1Q01389 1478 aa-2.39□□□□□ -2.79
SDH6YDR379C-A YOR316C-AQ3E806 69 aa-2.4□□□□□ -2.79
SDH6YDR379C-A VMR1P38735 1592 aa-2.4□□□□□ -2.79
SDH6YDR379C-A YSY6P38374 65 aa-2.43□□□□□ -2.8
SDH6YDR379C-A FLO1P32768 1537 aa-2.43□□□□□ -2.8
SDH6YDR379C-A PDR5P33302 1511 aaKnown RBP-2.45□□□□□ -2.8
SDH6YDR379C-A YMR105W-AQ8TGS8 64 aa-2.46□□□□□ -2.8
SDH6YDR379C-A YFL041W-AQ3E817 63 aa-2.48□□□□□ -2.81
SDH6YDR379C-A DOP1Q03921 1698 aa-2.49□□□□□ -2.81
SDH6YDR379C-A TCB3Q03640 1545 aaKnown RBP-2.51□□□□□ -2.81
SDH6YDR379C-A YHR213W-AQ8TGT4 77 aa-2.55□□□□□ -2.82
SDH6YDR379C-A SSK2P53599 1579 aa-2.56□□□□□ -2.82
SDH6YDR379C-A YCF1P39109 1515 aaKnown RBP-2.57□□□□□ -2.82
SDH6YDR379C-A YIL102C-AQ2V2P5 75 aa-2.58□□□□□ -2.82
SDH6YDR379C-A YPR010C-AA5Z2X5 72 aa-2.59□□□□□ -2.82
SDH6YDR379C-A VPS13Q07878 3144 aa-2.59□□□□□ -2.82
SDH6YDR379C-A YHR073W-AP0C5N7 58 aa-2.61□□□□□ -2.83
SDH6YDR379C-A SCC2Q04002 1493 aa-2.62□□□□□ -2.83
SDH6YDR379C-A YBT1P32386 1661 aa-2.63□□□□□ -2.83
SDH6YDR379C-A NUP159P40477 1460 aa-2.63□□□□□ -2.83
SDH6YDR379C-A NUP188P52593 1655 aaKnown RBP-2.63□□□□□ -2.83
SDH6YDR379C-A PAI3P01094 68 aa-2.67□□□□□ -2.84
SDH6YDR379C-A GCN2P15442 1659 aa-2.69□□□□□ -2.84
SDH6YDR379C-A YJL133C-AQ3E7A3 74 aa-2.69□□□□□ -2.84
SDH6YDR379C-A ULS1Q08562 1619 aa-2.7□□□□□ -2.84
SDH6YDR379C-A MYO4P32492 1471 aa-2.74□□□□□ -2.85
SDH6YDR379C-A STU1P38198 1513 aa-2.77□□□□□ -2.85
SDH6YDR379C-A DDR2P89113 61 aa-2.78□□□□□ -2.85
SDH6YDR379C-A CDC25P04821 1589 aa-2.78□□□□□ -2.86
SDH6YDR379C-A ATG2P53855 1592 aa-2.81□□□□□ -2.86
SDH6YDR379C-A COX9P07255 59 aa-2.82□□□□□ -2.86
SDH6YDR379C-A BUD3P25558 1636 aa-2.83□□□□□ -2.86
SDH6YDR379C-A SKI3P17883 1432 aaKnown RBP-2.93□□□□□ -2.88
SDH6YDR379C-A YKL023C-AQ2V2P3 75 aa-2.94□□□□□ -2.88
SDH6YDR379C-A VMA9Q3E7B6 73 aa-2.95□□□□□ -2.88
SDH6YDR379C-A YLR342W-AQ3E810 57 aa-2.98□□□□□ -2.89
SDH6YDR379C-A NUP170P38181 1502 aa-2.99□□□□□ -2.89
SDH6YDR379C-A HIR3P47171 1648 aa-3.04□□□□□ -2.9
SDH6YDR379C-A YJL127C-BQ3E828 52 aa-3.06□□□□□ -2.9
SDH6YDR379C-A NUP192P47054 1683 aa-3.08□□□□□ -2.9
SDH6YDR379C-A USO1P25386 1790 aa-3.1□□□□□ -2.91
SDH6YDR379C-A PEP1P32319 1579 aa-3.1□□□□□ -2.91
SDH6YDR379C-A PMP3P87284 55 aa-3.16□□□□□ -2.92
SDH6YDR379C-A YFR010W-AP0C5N0 62 aa-3.23□□□□□ -2.93
SDH6YDR379C-A YLL066W-BQ8TGJ7 56 aa-3.23□□□□□ -2.93
SDH6YDR379C-A SMX2P40204 77 aaKnown RBP-3.26□□□□□ -2.93
SDH6YDR379C-A RKR1Q04781 1562 aa-3.29□□□□□ -2.94
SDH6YDR379C-A TOM1Q03280 3268 aa-3.36□□□□□ -2.95
SDH6YDR379C-A SPT6P23615 1451 aaKnown RBP-3.36□□□□□ -2.95
SDH6YDR379C-A MON2P48563 1636 aaPredicted RBP-3.37□□□□□ -2.95
SDH6YDR379C-A HOR7Q05827 59 aa-3.39□□□□□ -2.95
SDH6YDR379C-A CHC1P22137 1653 aaKnown RBP-3.5□□□□□ -2.97
SDH6YDR379C-A MLP2P40457 1679 aa-3.59□□□□□ -2.98
SDH6YDR379C-A TOM7P53507 60 aa-3.64□□□□□ -2.99
SDH6YDR379C-A NCE101Q02820 53 aa-4.02□□□□□ -3.05
SDH6YDR379C-A RPL39P04650 51 aa-4.4□□□□□ -3.11
SDH6YDR379C-A Q0297Q9ZZV8 51 aa-4.55□□□□□ -3.14
SDH6YDR379C-A YIL046W-AQ3E7Z4 54 aa-4.92□□□□□ -3.2
SDH6YDR379C-A YDR034W-BQ6Q5X2 51 aa-5.93□□□□□ -3.36
Retrieved 63 of 5,963 RNA–protein pairs in 7.9 ms