RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C YHR213W-AQ8TGT4 77 aa-1.43□□□□□ -2.64
SNU56YDR240C YSY6P38374 65 aa-1.44□□□□□ -2.64
SNU56YDR240C YML054C-AQ3E809 52 aa-1.46□□□□□ -2.64
SNU56YDR240C TY1B-DR4Q07793 1604 aa-1.47□□□□□ -2.65
SNU56YDR240C RPO31P04051 1460 aa-1.47□□□□□ -2.65
SNU56YDR240C YOR093CQ12275 1648 aa-1.48□□□□□ -2.65
SNU56YDR240C NUP159P40477 1460 aa-1.49□□□□□ -2.65
SNU56YDR240C VMR1P38735 1592 aa-1.49□□□□□ -2.65
SNU56YDR240C RPL29P05747 59 aaPredicted RBP-1.51□□□□□ -2.65
SNU56YDR240C YDR034C-AP0C289 58 aa-1.51□□□□□ -2.65
SNU56YDR240C YOR316C-AQ3E806 69 aa-1.52□□□□□ -2.65
SNU56YDR240C PAI3P01094 68 aa-1.54□□□□□ -2.66
SNU56YDR240C YIL102C-AQ2V2P5 75 aa-1.54□□□□□ -2.66
SNU56YDR240C IRA2P19158 3079 aa-1.54□□□□□ -2.66
SNU56YDR240C SCC2Q04002 1493 aa-1.55□□□□□ -2.66
SNU56YDR240C TCB3Q03640 1545 aaKnown RBP-1.56□□□□□ -2.66
SNU56YDR240C FLO1P32768 1537 aa-1.57□□□□□ -2.66
SNU56YDR240C PDR5P33302 1511 aaKnown RBP-1.57□□□□□ -2.66
SNU56YDR240C SKI3P17883 1432 aaKnown RBP-1.61□□□□□ -2.67
SNU56YDR240C YPR010C-AA5Z2X5 72 aa-1.62□□□□□ -2.67
SNU56YDR240C MYO4P32492 1471 aa-1.64□□□□□ -2.67
SNU56YDR240C YCF1P39109 1515 aaKnown RBP-1.65□□□□□ -2.67
SNU56YDR240C YMR105W-AQ8TGS8 64 aa-1.65□□□□□ -2.67
SNU56YDR240C SSK2P53599 1579 aa-1.66□□□□□ -2.67
SNU56YDR240C YBT1P32386 1661 aa-1.71□□□□□ -2.68
SNU56YDR240C YHR073W-AP0C5N7 58 aa-1.73□□□□□ -2.69
SNU56YDR240C NUP188P52593 1655 aaKnown RBP-1.73□□□□□ -2.69
SNU56YDR240C YJL133C-AQ3E7A3 74 aa-1.74□□□□□ -2.69
SNU56YDR240C VPS13Q07878 3144 aa-1.76□□□□□ -2.69
SNU56YDR240C STU1P38198 1513 aa-1.78□□□□□ -2.69
SNU56YDR240C DDR2P89113 61 aa-1.78□□□□□ -2.69
SNU56YDR240C VMA9Q3E7B6 73 aa-1.78□□□□□ -2.69
SNU56YDR240C YKL023C-AQ2V2P3 75 aa-1.79□□□□□ -2.7
SNU56YDR240C COX9P07255 59 aa-1.8□□□□□ -2.7
SNU56YDR240C ATG2P53855 1592 aa-1.8□□□□□ -2.7
SNU56YDR240C BUD3P25558 1636 aa-1.81□□□□□ -2.7
SNU56YDR240C CDC25P04821 1589 aa-1.81□□□□□ -2.7
SNU56YDR240C ULS1Q08562 1619 aa-1.82□□□□□ -2.7
SNU56YDR240C GCN2P15442 1659 aa-1.83□□□□□ -2.7
SNU56YDR240C NUP170P38181 1502 aa-1.89□□□□□ -2.71
SNU56YDR240C TOM1Q03280 3268 aa-1.89□□□□□ -2.71
SNU56YDR240C YLR342W-AQ3E810 57 aa-1.9□□□□□ -2.71
SNU56YDR240C YFR010W-AP0C5N0 62 aa-1.91□□□□□ -2.72
SNU56YDR240C PEP1P32319 1579 aa-1.95□□□□□ -2.72
SNU56YDR240C NUP192P47054 1683 aa-1.99□□□□□ -2.73
SNU56YDR240C YJL127C-BQ3E828 52 aa-2.01□□□□□ -2.73
SNU56YDR240C HIR3P47171 1648 aa-2.03□□□□□ -2.74
SNU56YDR240C USO1P25386 1790 aa-2.05□□□□□ -2.74
SNU56YDR240C PMP3P87284 55 aa-2.08□□□□□ -2.74
SNU56YDR240C SPT6P23615 1451 aaKnown RBP-2.08□□□□□ -2.74
SNU56YDR240C SMX2P40204 77 aaKnown RBP-2.1□□□□□ -2.75
SNU56YDR240C RKR1Q04781 1562 aa-2.12□□□□□ -2.75
SNU56YDR240C YLL066W-BQ8TGJ7 56 aa-2.16□□□□□ -2.76
SNU56YDR240C HOR7Q05827 59 aa-2.22□□□□□ -2.77
SNU56YDR240C MON2P48563 1636 aaPredicted RBP-2.29□□□□□ -2.78
SNU56YDR240C CHC1P22137 1653 aaKnown RBP-2.38□□□□□ -2.79
SNU56YDR240C MLP2P40457 1679 aa-2.42□□□□□ -2.8
SNU56YDR240C TOM7P53507 60 aa-2.46□□□□□ -2.8
SNU56YDR240C NCE101Q02820 53 aa-2.67□□□□□ -2.84
SNU56YDR240C RPL39P04650 51 aa-2.98□□□□□ -2.89
SNU56YDR240C Q0297Q9ZZV8 51 aa-3.03□□□□□ -2.89
SNU56YDR240C YIL046W-AQ3E7Z4 54 aa-3.3□□□□□ -2.94
SNU56YDR240C YDR034W-BQ6Q5X2 51 aa-3.32□□□□□ -2.94
Retrieved 63 of 5,963 RNA–protein pairs in 6.7 ms