RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C YOL131WQ08270 108 aa-1.69□□□□□ -2.68
PCF11YDR228C IML1P47170 1584 aa-1.7□□□□□ -2.68
PCF11YDR228C YOR093CQ12275 1648 aa-1.7□□□□□ -2.68
PCF11YDR228C ESC1Q03661 1658 aaKnown RBP-1.72□□□□□ -2.68
PCF11YDR228C YOR316C-AQ3E806 69 aa-1.73□□□□□ -2.69
PCF11YDR228C BCK1Q01389 1478 aa-1.73□□□□□ -2.69
PCF11YDR228C YHR073W-AP0C5N7 58 aa-1.74□□□□□ -2.69
PCF11YDR228C RPO31P04051 1460 aa-1.75□□□□□ -2.69
PCF11YDR228C UFD4P33202 1483 aa-1.76□□□□□ -2.69
PCF11YDR228C ULS1Q08562 1619 aa-1.77□□□□□ -2.69
PCF11YDR228C PDR5P33302 1511 aaKnown RBP-1.77□□□□□ -2.69
PCF11YDR228C YSY6P38374 65 aa-1.77□□□□□ -2.69
PCF11YDR228C VMR1P38735 1592 aa-1.78□□□□□ -2.69
PCF11YDR228C FLO1P32768 1537 aa-1.79□□□□□ -2.7
PCF11YDR228C YFL041W-AQ3E817 63 aa-1.8□□□□□ -2.7
PCF11YDR228C YOL166W-AQ8TGJ1 51 aa-1.8□□□□□ -2.7
PCF11YDR228C SSK2P53599 1579 aa-1.8□□□□□ -2.7
PCF11YDR228C TCB3Q03640 1545 aaKnown RBP-1.83□□□□□ -2.7
PCF11YDR228C YDR034W-BQ6Q5X2 51 aa-1.85□□□□□ -2.71
PCF11YDR228C DOP1Q03921 1698 aa-1.85□□□□□ -2.71
PCF11YDR228C NUP192P47054 1683 aa-1.86□□□□□ -2.71
PCF11YDR228C YCF1P39109 1515 aaKnown RBP-1.86□□□□□ -2.71
PCF11YDR228C YHR213W-AQ8TGT4 77 aa-1.88□□□□□ -2.71
PCF11YDR228C YIL102C-AQ2V2P5 75 aa-1.89□□□□□ -2.71
PCF11YDR228C YPR010C-AA5Z2X5 72 aa-1.9□□□□□ -2.71
PCF11YDR228C NUP188P52593 1655 aaKnown RBP-1.93□□□□□ -2.72
PCF11YDR228C YJL133C-AQ3E7A3 74 aa-1.94□□□□□ -2.72
PCF11YDR228C CDC25P04821 1589 aa-1.94□□□□□ -2.72
PCF11YDR228C RKR1Q04781 1562 aa-1.94□□□□□ -2.72
PCF11YDR228C PAI3P01094 68 aa-1.94□□□□□ -2.72
PCF11YDR228C YLL066W-BQ8TGJ7 56 aa-1.94□□□□□ -2.72
PCF11YDR228C GCN2P15442 1659 aa-1.95□□□□□ -2.72
PCF11YDR228C SCC2Q04002 1493 aa-1.95□□□□□ -2.72
PCF11YDR228C YBT1P32386 1661 aa-1.96□□□□□ -2.72
PCF11YDR228C NUP159P40477 1460 aa-1.96□□□□□ -2.72
PCF11YDR228C COX9P07255 59 aa-2.01□□□□□ -2.73
PCF11YDR228C STU1P38198 1513 aa-2.01□□□□□ -2.73
PCF11YDR228C MYO4P32492 1471 aa-2.02□□□□□ -2.73
PCF11YDR228C DDR2P89113 61 aa-2.03□□□□□ -2.73
PCF11YDR228C Q0297Q9ZZV8 51 aa-2.03□□□□□ -2.73
PCF11YDR228C ATG2P53855 1592 aa-2.08□□□□□ -2.74
PCF11YDR228C YIL046W-AQ3E7Z4 54 aa-2.08□□□□□ -2.74
PCF11YDR228C HIR3P47171 1648 aa-2.1□□□□□ -2.75
PCF11YDR228C BUD3P25558 1636 aa-2.1□□□□□ -2.75
PCF11YDR228C SKI3P17883 1432 aaKnown RBP-2.13□□□□□ -2.75
PCF11YDR228C PMP3P87284 55 aa-2.14□□□□□ -2.75
PCF11YDR228C TOM7P53507 60 aa-2.16□□□□□ -2.75
PCF11YDR228C YKL023C-AQ2V2P3 75 aa-2.16□□□□□ -2.76
PCF11YDR228C SPT6P23615 1451 aaKnown RBP-2.17□□□□□ -2.76
PCF11YDR228C VMA9Q3E7B6 73 aa-2.17□□□□□ -2.76
PCF11YDR228C YLR342W-AQ3E810 57 aa-2.18□□□□□ -2.76
PCF11YDR228C YJL127C-BQ3E828 52 aa-2.19□□□□□ -2.76
PCF11YDR228C NUP170P38181 1502 aa-2.19□□□□□ -2.76
PCF11YDR228C CHC1P22137 1653 aaKnown RBP-2.22□□□□□ -2.76
PCF11YDR228C MON2P48563 1636 aaPredicted RBP-2.24□□□□□ -2.77
PCF11YDR228C HOR7Q05827 59 aa-2.24□□□□□ -2.77
PCF11YDR228C PEP1P32319 1579 aa-2.28□□□□□ -2.78
PCF11YDR228C MLP2P40457 1679 aa-2.32□□□□□ -2.78
PCF11YDR228C USO1P25386 1790 aa-2.33□□□□□ -2.78
PCF11YDR228C SMX2P40204 77 aaKnown RBP-2.35□□□□□ -2.79
PCF11YDR228C YFR010W-AP0C5N0 62 aa-2.43□□□□□ -2.8
PCF11YDR228C RPL39P04650 51 aa-2.51□□□□□ -2.81
PCF11YDR228C NCE101Q02820 53 aa-2.53□□□□□ -2.81
Retrieved 63 of 5,963 RNA–protein pairs in 36 ms