RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W YOL166W-AQ8TGJ1 51 aa-3.26□□□□□ -2.93
HMRA1YCR097W RRP5Q05022 1729 aaKnown RBP-3.3□□□□□ -2.94
HMRA1YCR097W YOR316C-AQ3E806 69 aa-3.3□□□□□ -2.94
HMRA1YCR097W YSY6P38374 65 aa-3.33□□□□□ -2.94
HMRA1YCR097W RPO31P04051 1460 aa-3.35□□□□□ -2.94
HMRA1YCR097W YFL041W-AQ3E817 63 aa-3.35□□□□□ -2.95
HMRA1YCR097W VMR1P38735 1592 aa-3.35□□□□□ -2.95
HMRA1YCR097W FLO1P32768 1537 aa-3.39□□□□□ -2.95
HMRA1YCR097W PDR5P33302 1511 aaKnown RBP-3.4□□□□□ -2.95
HMRA1YCR097W IRA1P18963 3092 aa-3.42□□□□□ -2.96
HMRA1YCR097W TCB3Q03640 1545 aaKnown RBP-3.44□□□□□ -2.96
HMRA1YCR097W YMR105W-AQ8TGS8 64 aa-3.44□□□□□ -2.96
HMRA1YCR097W YHR213W-AQ8TGT4 77 aa-3.46□□□□□ -2.96
HMRA1YCR097W DOP1Q03921 1698 aa-3.47□□□□□ -2.97
HMRA1YCR097W IRA2P19158 3079 aa-3.5□□□□□ -2.97
HMRA1YCR097W YIL102C-AQ2V2P5 75 aa-3.53□□□□□ -2.97
HMRA1YCR097W YPR010C-AA5Z2X5 72 aa-3.57□□□□□ -2.98
HMRA1YCR097W NUP159P40477 1460 aa-3.57□□□□□ -2.98
HMRA1YCR097W SSK2P53599 1579 aa-3.58□□□□□ -2.98
HMRA1YCR097W YCF1P39109 1515 aaKnown RBP-3.59□□□□□ -2.98
HMRA1YCR097W SCC2Q04002 1493 aa-3.59□□□□□ -2.98
HMRA1YCR097W PAI3P01094 68 aa-3.64□□□□□ -2.99
HMRA1YCR097W YHR073W-AP0C5N7 58 aa-3.66□□□□□ -3
HMRA1YCR097W YJL133C-AQ3E7A3 74 aa-3.74□□□□□ -3.01
HMRA1YCR097W YBT1P32386 1661 aa-3.75□□□□□ -3.01
HMRA1YCR097W NUP188P52593 1655 aaKnown RBP-3.76□□□□□ -3.01
HMRA1YCR097W MYO4P32492 1471 aa-3.77□□□□□ -3.01
HMRA1YCR097W ULS1Q08562 1619 aa-3.83□□□□□ -3.02
HMRA1YCR097W STU1P38198 1513 aa-3.84□□□□□ -3.02
HMRA1YCR097W DDR2P89113 61 aa-3.86□□□□□ -3.03
HMRA1YCR097W GCN2P15442 1659 aa-3.89□□□□□ -3.03
HMRA1YCR097W COX9P07255 59 aa-3.89□□□□□ -3.03
HMRA1YCR097W CDC25P04821 1589 aa-3.92□□□□□ -3.04
HMRA1YCR097W ATG2P53855 1592 aa-3.92□□□□□ -3.04
HMRA1YCR097W VPS13Q07878 3144 aa-3.93□□□□□ -3.04
HMRA1YCR097W BUD3P25558 1636 aa-3.98□□□□□ -3.05
HMRA1YCR097W YKL023C-AQ2V2P3 75 aa-3.99□□□□□ -3.05
HMRA1YCR097W SKI3P17883 1432 aaKnown RBP-3.99□□□□□ -3.05
HMRA1YCR097W VMA9Q3E7B6 73 aa-4.03□□□□□ -3.05
HMRA1YCR097W NUP170P38181 1502 aa-4.11□□□□□ -3.07
HMRA1YCR097W YLR342W-AQ3E810 57 aa-4.13□□□□□ -3.07
HMRA1YCR097W PEP1P32319 1579 aa-4.27□□□□□ -3.09
HMRA1YCR097W YJL127C-BQ3E828 52 aa-4.28□□□□□ -3.09
HMRA1YCR097W HIR3P47171 1648 aa-4.33□□□□□ -3.1
HMRA1YCR097W NUP192P47054 1683 aa-4.35□□□□□ -3.11
HMRA1YCR097W YFR010W-AP0C5N0 62 aa-4.42□□□□□ -3.12
HMRA1YCR097W PMP3P87284 55 aa-4.42□□□□□ -3.12
HMRA1YCR097W YLL066W-BQ8TGJ7 56 aa-4.51□□□□□ -3.13
HMRA1YCR097W USO1P25386 1790 aa-4.51□□□□□ -3.13
HMRA1YCR097W SMX2P40204 77 aaKnown RBP-4.52□□□□□ -3.13
HMRA1YCR097W RKR1Q04781 1562 aa-4.61□□□□□ -3.15
HMRA1YCR097W SPT6P23615 1451 aaKnown RBP-4.62□□□□□ -3.15
HMRA1YCR097W HOR7Q05827 59 aa-4.7□□□□□ -3.16
HMRA1YCR097W MON2P48563 1636 aaPredicted RBP-4.8□□□□□ -3.18
HMRA1YCR097W TOM1Q03280 3268 aa-4.94□□□□□ -3.2
HMRA1YCR097W CHC1P22137 1653 aaKnown RBP-5.05□□□□□ -3.22
HMRA1YCR097W MLP2P40457 1679 aa-5.12□□□□□ -3.23
HMRA1YCR097W TOM7P53507 60 aa-5.14□□□□□ -3.23
HMRA1YCR097W NCE101Q02820 53 aa-5.61□□□□□ -3.31
HMRA1YCR097W RPL39P04650 51 aa-6.2□□□□□ -3.4
HMRA1YCR097W Q0297Q9ZZV8 51 aa-6.42□□□□□ -3.44
HMRA1YCR097W YIL046W-AQ3E7Z4 54 aa-6.9□□□□□ -3.51
HMRA1YCR097W YDR034W-BQ6Q5X2 51 aa-8.38□□□□□ -3.75
Retrieved 63 of 5,963 RNA–protein pairs in 5.7 ms