RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.71□□□□□ -0.05
PCDHGC3-208ENST00000622836 SH3BP1Q9Y3L3 701 aa14.71□□□□□ -0.05
PCDHGC3-208ENST00000622836 F5P12259 2224 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 SPECC1L-ADORA2AF8WAN1 911 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 TULP2O00295 520 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 THAP12O43422 761 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 ZBED1O96006 694 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 IRF1P10914 325 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 RARGP13631 454 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 LCP1P13796 627 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 ARSAP15289 507 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 TCF3P15923 654 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 GNA15P30679 374 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 ATP5C1P36542 298 aaKnown RBP14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 PLA2G4AP47712 749 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 RGS7P49802 495 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 ZNF132P52740 706 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 NUBP1P53384 320 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 GOLGA8FQ08AF8 430 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 GOLGA8DPQ0D2H9 430 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 ADIGQ0VDE8 80 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 KRT31Q15323 416 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 CNGA2Q16280 664 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 C10orf120Q5SQS8 335 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 RSRC2Q7L4I2 434 aaKnown RBP14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 CCDC186Q7Z3E2 898 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 RALGPS2Q86X27 583 aaPredicted RBP14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 ARHGAP18Q8N392 663 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 AOPEPQ8N6M6 819 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 SECISBP2LQ93073 1101 aaKnown RBP14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 ATP2A3Q93084 1043 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 LSM14BQ9BX40 385 aaKnown RBP14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 NMUR1Q9HB89 426 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 CNTN6Q9UQ52 1028 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 MTF2Q9Y483 593 aaPredicted RBP14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 USP3Q9Y6I4 520 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 COL4A3Q01955 1670 aa14.7□□□□□ -0.06
PCDHGC3-208ENST00000622836 KMT2EQ8IZD2 1858 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 MUC6Q6W4X9 2439 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 SLC9A3R1O14745 358 aaPredicted RBP14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 SCAMP3O14828 347 aaKnown RBP14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 GALR2O43603 387 aaPredicted RBP14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 NFATC1O95644 943 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 TBX18O95935 607 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 TARSP26639 723 aaKnown RBP14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 CTHP32929 405 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 PGFP49763 221 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 MLLT6P55198 1093 aaPredicted RBP14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 YWHAGP61981 247 aaKnown RBP eCLIP14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 ZXDBP98169 803 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 AMPD2Q01433 879 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 NR1H3Q13133 447 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 RAB41Q5JT25 222 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 CCDC105Q8IYK2 499 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 DTWD2Q8NBA8 298 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 PCMTD1Q96MG8 357 aaPredicted RBP14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 CDK5RAP1Q96SZ6 601 aaKnown RBP14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 ZSWIM1Q9BR11 485 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 OSBPL6Q9BZF3 934 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 ULBP1Q9BZM6 244 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 SIX2Q9NPC8 291 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 CYLDQ9NQC7 956 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 HPS4Q9NQG7 708 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 OSER1Q9NX31 292 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 NUDT5Q9UKK9 219 aa14.69□□□□□ -0.06
PCDHGC3-208ENST00000622836 HELZP42694 1942 aaKnown RBP14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 SYCE3A1L190 88 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 SMTNL1A8MU46 457 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 PIK3R2O00459 728 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 PTK2Q05397 1052 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 PON2Q15165 354 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 EML3Q32P44 896 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 BTBD8Q5XKL5 378 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 SCD5Q86SK9 330 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 MIB1Q86YT6 1006 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 ZNF606Q8WXB4 792 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 KCTD13Q8WZ19 329 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 SHC3Q92529 594 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 EXOC4Q96A65 974 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 LINC00597Q9H2U6 94 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 ECT2Q9H8V3 914 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 ST7Q9NRC1 585 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 CLIC5Q9NZA1 410 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 TBC1D14Q9P2M4 693 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 RASAL2Q9UJF2 1139 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 DNMT3LQ9UJW3 386 aa14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 LSM7Q9UK45 103 aaKnown RBP14.68□□□□□ -0.06
PCDHGC3-208ENST00000622836 COL4A2P08572 1712 aa14.67□□□□□ -0.06
PCDHGC3-208ENST00000622836 MIA3Q5JRA6 1907 aa14.67□□□□□ -0.06
PCDHGC3-208ENST00000622836 E2F8A0AVK6 867 aa14.67□□□□□ -0.06
PCDHGC3-208ENST00000622836 BECN2A8MW95 431 aa14.67□□□□□ -0.06
PCDHGC3-208ENST00000622836 MDM4O15151 490 aa14.67□□□□□ -0.06
PCDHGC3-208ENST00000622836 MAGEA9P43362 315 aa14.67□□□□□ -0.06
PCDHGC3-208ENST00000622836 ZNF165P49910 485 aa14.67□□□□□ -0.06
PCDHGC3-208ENST00000622836 COPB1P53618 953 aaKnown RBP14.67□□□□□ -0.06
PCDHGC3-208ENST00000622836 PTPN5P54829 565 aa14.67□□□□□ -0.06
PCDHGC3-208ENST00000622836 KCNMA1Q12791 1236 aa14.67□□□□□ -0.06
PCDHGC3-208ENST00000622836 LRRC32Q14392 662 aa14.67□□□□□ -0.06
PCDHGC3-208ENST00000622836 PKDCCQ504Y2 493 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms