RNA–Protein interactions for RNA: ENST00000619530.1

LINC00221-202, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-202ENST00000619530 NR1H3Q13133 447 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 PPP2R5DQ14738 602 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 TTI2Q6NXR4 508 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 CLEC20AQ6ZU45 233 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 GPRIN1Q7Z2K8 1008 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 SPEM1Q8N4L4 309 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 OVCA2Q8WZ82 227 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 SLC35C1Q96A29 364 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 TMEM176AQ96HP8 235 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 MRFAP1L1Q96HT8 127 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 SEMA4AQ9H3S1 761 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 FBXO44Q9H4M3 255 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 PRMT8Q9NR22 394 aaPredicted RBP16.54■□□□□ 0.24
LINC00221-202ENST00000619530 ZSCAN32Q9NX65 697 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 RIF1Q5UIP0 2472 aaKnown RBP16.54■□□□□ 0.24
LINC00221-202ENST00000619530 HELZP42694 1942 aaKnown RBP16.54■□□□□ 0.24
LINC00221-202ENST00000619530 VPS13AQ96RL7 3174 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 BICDL2A1A5D9 508 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 EGFP01133 1207 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 IRF1P10914 325 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 ACO1P21399 889 aaKnown RBP16.54■□□□□ 0.24
LINC00221-202ENST00000619530 RAD23BP54727 409 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 CCINQ13939 588 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 TMEM196Q5HYL7 178 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 HEATR6Q6AI08 1181 aaKnown RBP16.54■□□□□ 0.24
LINC00221-202ENST00000619530 TTC39CQ8N584 583 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 SLC4A11Q8NBS3 891 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 P2RY13Q9BPV8 354 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 IER2Q9BTL4 223 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 KCNF1Q9H3M0 494 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 C2orf42Q9NWW7 574 aa16.54■□□□□ 0.24
LINC00221-202ENST00000619530 USP34Q70CQ2 3546 aa16.53■□□□□ 0.24
LINC00221-202ENST00000619530 MYO15AQ9UKN7 3530 aa16.53■□□□□ 0.24
LINC00221-202ENST00000619530 SMTNL1A8MU46 457 aa16.53■□□□□ 0.24
LINC00221-202ENST00000619530 HHLA1C9JL84 531 aa16.53■□□□□ 0.24
LINC00221-202ENST00000619530 TRDMT1O14717 391 aaKnown RBP16.53■□□□□ 0.24
LINC00221-202ENST00000619530 OLFM2O95897 454 aa16.53■□□□□ 0.24
LINC00221-202ENST00000619530 TPM2P07951 284 aa16.53■□□□□ 0.24
LINC00221-202ENST00000619530 TCF3P15923 654 aa16.53■□□□□ 0.24
LINC00221-202ENST00000619530 FMO5P49326 533 aa16.53■□□□□ 0.24
LINC00221-202ENST00000619530 PAK1Q13153 545 aa16.53■□□□□ 0.24
LINC00221-202ENST00000619530 CUL2Q13617 745 aa16.53■□□□□ 0.24
LINC00221-202ENST00000619530 DPCR1Q3MIW9 517 aa16.53■□□□□ 0.24
LINC00221-202ENST00000619530 MAMSTRQ6ZN01 415 aa16.53■□□□□ 0.24
LINC00221-202ENST00000619530 CREBRFQ8IUR6 639 aa16.53■□□□□ 0.24
LINC00221-202ENST00000619530 HINFPQ9BQA5 517 aa16.53■□□□□ 0.24
LINC00221-202ENST00000619530 SRRTQ9BXP5 876 aaKnown RBP16.53■□□□□ 0.24
LINC00221-202ENST00000619530 DUSP16Q9BY84 665 aa16.53■□□□□ 0.24
LINC00221-202ENST00000619530 TLR8Q9NR97 1041 aaKnown RBP16.53■□□□□ 0.24
LINC00221-202ENST00000619530 COQ4Q9Y3A0 265 aa16.53■□□□□ 0.24
LINC00221-202ENST00000619530 PCDHGA2Q9Y5H1 932 aa16.53■□□□□ 0.24
LINC00221-202ENST00000619530 SLC9A3R1O14745 358 aaPredicted RBP16.52■□□□□ 0.23
LINC00221-202ENST00000619530 CYP26A1O43174 497 aa16.52■□□□□ 0.23
LINC00221-202ENST00000619530 NFATC1O95644 943 aa16.52■□□□□ 0.23
LINC00221-202ENST00000619530 TBX18O95935 607 aa16.52■□□□□ 0.23
LINC00221-202ENST00000619530 HOXC13P31276 330 aa16.52■□□□□ 0.23
LINC00221-202ENST00000619530 NRLP54845 237 aa16.52■□□□□ 0.23
LINC00221-202ENST00000619530 DMWDQ09019 674 aa16.52■□□□□ 0.23
LINC00221-202ENST00000619530 SNX30Q5VWJ9 437 aa16.52■□□□□ 0.23
LINC00221-202ENST00000619530 DDX42Q86XP3 938 aaKnown RBP eCLIP16.52■□□□□ 0.23
LINC00221-202ENST00000619530 ADGRG2Q8IZP9 1017 aa16.52■□□□□ 0.23
LINC00221-202ENST00000619530 SYNPOQ8N3V7 929 aa16.52■□□□□ 0.23
LINC00221-202ENST00000619530 CD101Q93033 1021 aa16.52■□□□□ 0.23
LINC00221-202ENST00000619530 EXOC4Q96A65 974 aa16.52■□□□□ 0.23
LINC00221-202ENST00000619530 FAXDC2Q96IV6 333 aa16.52■□□□□ 0.23
LINC00221-202ENST00000619530 NUDT5Q9UKK9 219 aa16.52■□□□□ 0.23
LINC00221-202ENST00000619530 SCML2Q9UQR0 700 aa16.52■□□□□ 0.23
LINC00221-202ENST00000619530 SH3BP1Q9Y3L3 701 aa16.52■□□□□ 0.23
LINC00221-202ENST00000619530 FANCMQ8IYD8 2048 aa16.51■□□□□ 0.23
LINC00221-202ENST00000619530 A0A1W2PQH9 124 aa16.51■□□□□ 0.23
LINC00221-202ENST00000619530 FAM92AA1XBS5 289 aa16.51■□□□□ 0.23
LINC00221-202ENST00000619530 CHURC1-FNTBB4DL54 471 aa16.51■□□□□ 0.23
LINC00221-202ENST00000619530 TLR5O60602 858 aa16.51■□□□□ 0.23
LINC00221-202ENST00000619530 ZDHHC11BP0C7U3 371 aa16.51■□□□□ 0.23
LINC00221-202ENST00000619530 CD19P15391 556 aa16.51■□□□□ 0.23
LINC00221-202ENST00000619530 DRD1P21728 446 aa16.51■□□□□ 0.23
LINC00221-202ENST00000619530 FNTBP49356 437 aa16.51■□□□□ 0.23
LINC00221-202ENST00000619530 TERF1P54274 439 aa16.51■□□□□ 0.23
LINC00221-202ENST00000619530 PKN3Q6P5Z2 889 aa16.51■□□□□ 0.23
LINC00221-202ENST00000619530 CCDC186Q7Z3E2 898 aa16.51■□□□□ 0.23
LINC00221-202ENST00000619530 POLR3BQ9NW08 1133 aaPredicted RBP16.51■□□□□ 0.23
LINC00221-202ENST00000619530 MYOFQ9NZM1 2061 aa16.51■□□□□ 0.23
LINC00221-202ENST00000619530 FAM186AA6NE01 2351 aa16.51■□□□□ 0.23
LINC00221-202ENST00000619530 RNF40O75150 1001 aa16.5■□□□□ 0.23
LINC00221-202ENST00000619530 TDGF1P13385 188 aa16.5■□□□□ 0.23
LINC00221-202ENST00000619530 RARGP13631 454 aa16.5■□□□□ 0.23
LINC00221-202ENST00000619530 SLC6A11P48066 632 aa16.5■□□□□ 0.23
LINC00221-202ENST00000619530 YWHAEP62258 255 aaKnown RBP16.5■□□□□ 0.23
LINC00221-202ENST00000619530 CETN1Q12798 172 aa16.5■□□□□ 0.23
LINC00221-202ENST00000619530 DHCR24Q15392 516 aa16.5■□□□□ 0.23
LINC00221-202ENST00000619530 GOLGA7BQ2TAP0 167 aa16.5■□□□□ 0.23
LINC00221-202ENST00000619530 ZBTB44Q8NCP5 570 aa16.5■□□□□ 0.23
LINC00221-202ENST00000619530 NELL1Q92832 810 aa16.5■□□□□ 0.23
LINC00221-202ENST00000619530 WBP2Q969T9 261 aa16.5■□□□□ 0.23
LINC00221-202ENST00000619530 ZFRQ96KR1 1074 aaKnown RBP16.5■□□□□ 0.23
LINC00221-202ENST00000619530 NT5C1BQ96P26 610 aa16.5■□□□□ 0.23
LINC00221-202ENST00000619530 FAM126AQ9BYI3 521 aaPredicted RBP16.5■□□□□ 0.23
LINC00221-202ENST00000619530 NMUR1Q9HB89 426 aa16.5■□□□□ 0.23
LINC00221-202ENST00000619530 SPTLC3Q9NUV7 552 aa16.5■□□□□ 0.23
LINC00221-202ENST00000619530 OSER1Q9NX31 292 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms