RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 NET1Q7Z628 596 aaPredicted RBP19.44■□□□□ 0.7
SPAST-203ENST00000615843 OR8H2Q8N162 312 aa19.44■□□□□ 0.7
SPAST-203ENST00000615843 GORASP1Q9BQQ3 440 aa19.44■□□□□ 0.7
SPAST-203ENST00000615843 COPS7BQ9H9Q2 264 aaPredicted RBP19.44■□□□□ 0.7
SPAST-203ENST00000615843 USE1Q9NZ43 259 aa19.44■□□□□ 0.7
SPAST-203ENST00000615843 ITGB1BP2Q9UKP3 347 aa19.44■□□□□ 0.7
SPAST-203ENST00000615843 CYTH3O43739 400 aa19.44■□□□□ 0.7
SPAST-203ENST00000615843 GSTA3Q16772 222 aa19.44■□□□□ 0.7
SPAST-203ENST00000615843 BNIPLQ7Z465 357 aa19.44■□□□□ 0.7
SPAST-203ENST00000615843 CENPLQ8N0S6 344 aaPredicted RBP19.44■□□□□ 0.7
SPAST-203ENST00000615843 ZCCHC9Q8N567 271 aaKnown RBP19.44■□□□□ 0.7
SPAST-203ENST00000615843 MAPK11Q15759 364 aa19.44■□□□□ 0.7
SPAST-203ENST00000615843 CDRT15Q96T59 188 aa19.44■□□□□ 0.7
SPAST-203ENST00000615843 POP1Q99575 1024 aaKnown RBP19.44■□□□□ 0.7
SPAST-203ENST00000615843 NOL6Q9H6R4 1146 aaKnown RBP19.44■□□□□ 0.7
SPAST-203ENST00000615843 ACOT9Q9Y305 439 aa19.44■□□□□ 0.7
SPAST-203ENST00000615843 KBTBD13C9JR72 458 aa19.44■□□□□ 0.7
SPAST-203ENST00000615843 RAD23AP54725 363 aa19.44■□□□□ 0.7
SPAST-203ENST00000615843 DHFR2Q86XF0 187 aa19.44■□□□□ 0.7
SPAST-203ENST00000615843 TMC2Q8TDI7 906 aa19.44■□□□□ 0.7
SPAST-203ENST00000615843 LIN7AO14910 233 aaPredicted RBP19.43■□□□□ 0.7
SPAST-203ENST00000615843 PSMB9P28065 219 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 MGAT5Q09328 741 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 PHF21AQ96BD5 680 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 GPATCH2LQ9NWQ4 482 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 ACTL7BQ9Y614 415 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 OVOS2A0A0J9YW53 1432 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 OVOS2Q6IE36 1432 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 MMP10P09238 476 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 NUDT17P0C025 328 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 RGS4P49798 205 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 FAAP100Q0VG06 881 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 HPDLQ96IR7 371 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 GPRC5CQ9NQ84 441 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 CLIC5Q9NZA1 410 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 USP18Q9UMW8 372 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 SMIM31A0A1B0GVY4 71 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 DCXO43602 365 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 PRKAA1Q13131 559 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 COG2Q14746 738 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 DPY19L2Q6NUT2 758 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 CCDC33Q8N5R6 958 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 SLC35C1Q96A29 364 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 UBE2OQ9C0C9 1292 aaKnown RBP19.43■□□□□ 0.7
SPAST-203ENST00000615843 CHST7Q9NS84 486 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 CYP2C8P10632 490 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 NCALDP61601 193 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 Q4G0T1 1027 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 SNX32Q86XE0 403 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 SH3KBP1Q96B97 665 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 CATSPERBQ9H7T0 1116 aa19.43■□□□□ 0.7
SPAST-203ENST00000615843 ZNF862O60290 1169 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 PMPCBO75439 489 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 MUTP22033 750 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 MPP3Q13368 585 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 MAPRE1Q15691 268 aaKnown RBP19.42■□□□□ 0.7
SPAST-203ENST00000615843 AARS2Q5JTZ9 985 aaKnown RBP19.42■□□□□ 0.7
SPAST-203ENST00000615843 IL31Q6EBC2 164 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.42■□□□□ 0.7
SPAST-203ENST00000615843 OMA1Q96E52 524 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 CROTQ9UKG9 612 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 EIF3LQ9Y262 564 aaKnown RBP19.42■□□□□ 0.7
SPAST-203ENST00000615843 GOLGA8TH3BQL2 631 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 TRAF2Q12933 501 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 MYBPC2Q14324 1141 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 PKN3Q6P5Z2 889 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 VPS37AQ8NEZ2 397 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 PDZK1P1A8MUH7 402 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 PGM3O95394 542 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 PGK2P07205 417 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 PDK3Q15120 406 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 ETNPPLQ8TBG4 499 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 PNMA5Q96PV4 448 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.42■□□□□ 0.7
SPAST-203ENST00000615843 GPRC5DQ9NZD1 345 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 H2AFY2Q9P0M6 372 aaPredicted RBP19.42■□□□□ 0.7
SPAST-203ENST00000615843 C21orf2O43822 256 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 LSM8O95777 96 aaKnown RBP19.42■□□□□ 0.7
SPAST-203ENST00000615843 MRPS22P82650 360 aaKnown RBP19.42■□□□□ 0.7
SPAST-203ENST00000615843 CCDC153Q494R4 210 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 ACCSLQ4AC99 568 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 CDC42EP5Q6NZY7 148 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 ZCCHC23Q6ZST2 131 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 EFHBQ8N7U6 833 aa19.42■□□□□ 0.7
SPAST-203ENST00000615843 KCTD14Q9BQ13 255 aaPredicted RBP19.42■□□□□ 0.7
SPAST-203ENST00000615843 CHRM3P20309 590 aa19.41■□□□□ 0.7
SPAST-203ENST00000615843 ALDH1A3P47895 512 aa19.41■□□□□ 0.7
SPAST-203ENST00000615843 QPCTQ16769 361 aa19.41■□□□□ 0.7
SPAST-203ENST00000615843 GALNTL6Q49A17 601 aa19.41■□□□□ 0.7
SPAST-203ENST00000615843 ATP6AP1LQ52LC2 224 aa19.41■□□□□ 0.7
SPAST-203ENST00000615843 SNX31Q8N9S9 440 aa19.41■□□□□ 0.7
SPAST-203ENST00000615843 OSCP1Q8WVF1 389 aa19.41■□□□□ 0.7
SPAST-203ENST00000615843 SEPT1Q8WYJ6 367 aa19.41■□□□□ 0.7
SPAST-203ENST00000615843 RPL26L1Q9UNX3 145 aaKnown RBP19.41■□□□□ 0.7
SPAST-203ENST00000615843 RPL5P46777 297 aaKnown RBP19.41■□□□□ 0.7
SPAST-203ENST00000615843 IL5RAQ01344 420 aa19.41■□□□□ 0.7
SPAST-203ENST00000615843 C1QBPQ07021 282 aaKnown RBP19.41■□□□□ 0.7
SPAST-203ENST00000615843 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.41■□□□□ 0.7
SPAST-203ENST00000615843 PTRHD1Q6GMV3 140 aaKnown RBP19.41■□□□□ 0.7
SPAST-203ENST00000615843 RIPOR1Q6ZS17 1223 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms