RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 TRIM14Q14142 442 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 ASIC2Q16515 512 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 SFMBT2Q5VUG0 894 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 SPECC1LQ69YQ0 1117 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 TRIM72Q6ZMU5 477 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 GAS2L3Q86XJ1 694 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 MFSD6LQ8IWD5 586 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 YAF2Q8IY57 180 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 ZNF276Q8N554 614 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 WDTC1Q8N5D0 677 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 MSANTD4Q8NCY6 345 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 IPO4Q8TEX9 1081 aaKnown RBP14.98□□□□□ -0.01
CTSA-219ENST00000607841 RSAD2Q8WXG1 361 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 PPP1R13BQ96KQ4 1090 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 CYP2S1Q96SQ9 504 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 KXD1Q9BQD3 176 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 TRIM62Q9BVG3 475 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 TRIM5Q9C035 493 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 MIS12Q9H081 205 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 SYNCQ9H7C4 482 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 THG1LQ9NWX6 298 aaKnown RBP14.98□□□□□ -0.01
CTSA-219ENST00000607841 AIPL1Q9NZN9 384 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 MUTYHQ9UIF7 546 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 NOCTQ9UK39 431 aaKnown RBP14.98□□□□□ -0.01
CTSA-219ENST00000607841 ARHGAP26Q9UNA1 814 aa14.98□□□□□ -0.01
CTSA-219ENST00000607841 COCHO43405 550 aa14.97□□□□□ -0.01
CTSA-219ENST00000607841 DCXO43602 365 aa14.97□□□□□ -0.01
CTSA-219ENST00000607841 MMEP08473 750 aa14.97□□□□□ -0.01
CTSA-219ENST00000607841 MBL2P11226 248 aaPredicted RBP14.97□□□□□ -0.01
CTSA-219ENST00000607841 CDH5P33151 784 aaPredicted RBP14.97□□□□□ -0.01
CTSA-219ENST00000607841 DAOAP59103 153 aa14.97□□□□□ -0.01
CTSA-219ENST00000607841 ZBED6P86452 979 aa14.97□□□□□ -0.01
CTSA-219ENST00000607841 BTBD8Q5XKL5 378 aa14.97□□□□□ -0.01
CTSA-219ENST00000607841 KLHDC10Q6PID8 442 aa14.97□□□□□ -0.01
CTSA-219ENST00000607841 SCD5Q86SK9 330 aa14.97□□□□□ -0.01
CTSA-219ENST00000607841 DDX42Q86XP3 938 aaKnown RBP eCLIP14.97□□□□□ -0.01
CTSA-219ENST00000607841 C1orf131Q8NDD1 294 aaKnown RBP14.97□□□□□ -0.01
CTSA-219ENST00000607841 ST13P5Q8NFI4 369 aaPredicted RBP14.97□□□□□ -0.01
CTSA-219ENST00000607841 BPIFB1Q8TDL5 484 aa14.97□□□□□ -0.01
CTSA-219ENST00000607841 USP13Q92995 863 aaPredicted RBP14.97□□□□□ -0.01
CTSA-219ENST00000607841 SLC22A12Q96S37 553 aa14.97□□□□□ -0.01
CTSA-219ENST00000607841 RPP25Q9BUL9 199 aaKnown RBP14.97□□□□□ -0.01
CTSA-219ENST00000607841 TRMT61BQ9BVS5 477 aaKnown RBP14.97□□□□□ -0.01
CTSA-219ENST00000607841 RNF38Q9H0F5 515 aa14.97□□□□□ -0.01
CTSA-219ENST00000607841 SMG9Q9H0W8 520 aaKnown RBP14.97□□□□□ -0.01
CTSA-219ENST00000607841 NMUR1Q9HB89 426 aa14.97□□□□□ -0.01
CTSA-219ENST00000607841 ABCC13Q9NSE7 274 aa14.97□□□□□ -0.01
CTSA-219ENST00000607841 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.97□□□□□ -0.01
CTSA-219ENST00000607841 CAPN11Q9UMQ6 739 aa14.97□□□□□ -0.01
CTSA-219ENST00000607841 DUSP12Q9UNI6 340 aa14.97□□□□□ -0.01
CTSA-219ENST00000607841 LUC7L2Q9Y383 392 aaKnown RBP14.97□□□□□ -0.01
CTSA-219ENST00000607841 NOTCH4Q99466 2003 aa14.97□□□□□ -0.01
CTSA-219ENST00000607841 E5RJQ4 531 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 PIK3R2O00459 728 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 PRAMEF12O95522 483 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 SRFP11831 508 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 TCF3P15923 654 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 PFKPQ01813 784 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 GOLGA8FQ08AF8 430 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 GOLGA8DPQ0D2H9 430 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 BSPRYQ5W0U4 402 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 CC2D1AQ6P1N0 951 aaPredicted RBP14.96□□□□□ -0.01
CTSA-219ENST00000607841 VITQ6UXI7 678 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 RSRC2Q7L4I2 434 aaKnown RBP14.96□□□□□ -0.01
CTSA-219ENST00000607841 IRF2BP2Q7Z5L9 587 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 ERICH1Q86X53 443 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 ZDHHC17Q8IUH5 632 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 GPIHBP1Q8IV16 184 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 VSTM4Q8IW00 320 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 SCUBE3Q8IX30 993 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 RNF139Q8WU17 664 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 SLC20A1Q8WUM9 679 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 CPLX3Q8WVH0 158 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 SYN2Q92777 582 aaPredicted RBP14.96□□□□□ -0.01
CTSA-219ENST00000607841 AGPAT1Q99943 283 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 PLA2G2FQ9BZM2 168 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 CCSER2Q9H7U1 834 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 OLA1Q9NTK5 396 aaKnown RBP14.96□□□□□ -0.01
CTSA-219ENST00000607841 OSER1Q9NX31 292 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 CYTH4Q9UIA0 394 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 DNMT3LQ9UJW3 386 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 CPQQ9Y646 472 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 BZW2Q9Y6E2 419 aaKnown RBP14.96□□□□□ -0.01
CTSA-219ENST00000607841 C5orf42Q9H799 3197 aa14.96□□□□□ -0.01
CTSA-219ENST00000607841 YJEFN3A6XGL0 299 aa14.95□□□□□ -0.02
CTSA-219ENST00000607841 E7ENQ6 273 aa14.95□□□□□ -0.02
CTSA-219ENST00000607841 ZNF263O14978 683 aa14.95□□□□□ -0.02
CTSA-219ENST00000607841 GABBR2O75899 941 aa14.95□□□□□ -0.02
CTSA-219ENST00000607841 TNFAIP3P21580 790 aa14.95□□□□□ -0.02
CTSA-219ENST00000607841 PGFP49763 221 aa14.95□□□□□ -0.02
CTSA-219ENST00000607841 ZXDAP98168 799 aa14.95□□□□□ -0.02
CTSA-219ENST00000607841 FMO1Q01740 532 aa14.95□□□□□ -0.02
CTSA-219ENST00000607841 FCHO2Q0JRZ9 810 aa14.95□□□□□ -0.02
CTSA-219ENST00000607841 ARHGAP29Q52LW3 1261 aa14.95□□□□□ -0.02
CTSA-219ENST00000607841 C10orf120Q5SQS8 335 aa14.95□□□□□ -0.02
CTSA-219ENST00000607841 PPP1R2P3Q6NXS1 205 aa14.95□□□□□ -0.02
CTSA-219ENST00000607841 KIAA1958Q8N8K9 716 aa14.95□□□□□ -0.02
CTSA-219ENST00000607841 SH3RF2Q8TEC5 729 aa14.95□□□□□ -0.02
CTSA-219ENST00000607841 IRF7Q92985 503 aa14.95□□□□□ -0.02
CTSA-219ENST00000607841 C18orf8Q96DM3 657 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms