RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 C8orf33Q9H7E9 229 aaPredicted RBP14.78□□□□□ -0.04
SCAMP4-212ENST00000590266 NMUR1Q9HB89 426 aa14.78□□□□□ -0.04
SCAMP4-212ENST00000590266 ACP6Q9NPH0 428 aa14.78□□□□□ -0.04
SCAMP4-212ENST00000590266 HPS4Q9NQG7 708 aa14.78□□□□□ -0.04
SCAMP4-212ENST00000590266 OSER1Q9NX31 292 aa14.78□□□□□ -0.04
SCAMP4-212ENST00000590266 DNAJC12Q9UKB3 198 aa14.78□□□□□ -0.04
SCAMP4-212ENST00000590266 AJAP1Q9UKB5 411 aaPredicted RBP14.78□□□□□ -0.04
SCAMP4-212ENST00000590266 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.78□□□□□ -0.04
SCAMP4-212ENST00000590266 ZDBF2Q9HCK1 2354 aa14.78□□□□□ -0.04
SCAMP4-212ENST00000590266 MDM4O15151 490 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 OLFM2O95897 454 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 ZDHHC11BP0C7U3 371 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 PNMA6AP0CW24 399 aaPredicted RBP14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 SETSIPP0DME0 302 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 RARGP13631 454 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 GLULP15104 373 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 CDK11BP21127 795 aaKnown RBP14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 GNA15P30679 374 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 CTHP32929 405 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 ZNF132P52740 706 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 PON2Q15165 354 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 PDGFRLQ15198 375 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 STILQ15468 1287 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 CNGA2Q16280 664 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 C10orf120Q5SQS8 335 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 CDKAL1Q5VV42 579 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 SNX30Q5VWJ9 437 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 TXNDC11Q6PKC3 985 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 LCLAT1Q6UWP7 414 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 CCDC186Q7Z3E2 898 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 CPA6Q8N4T0 437 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 DTWD2Q8NBA8 298 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 ANKRD20A12PQ8NF67 263 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 NDRG1Q92597 394 aaKnown RBP14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 ATP2A3Q93084 1043 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 FAM81BQ96LP2 452 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 NAT10Q9H0A0 1025 aaKnown RBP14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 SIX2Q9NPC8 291 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 SH3BP1Q9Y3L3 701 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 ZNF318Q5VUA4 2279 aa14.77□□□□□ -0.05
SCAMP4-212ENST00000590266 SYCE3A1L190 88 aa14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 OTOL1A6NHN0 477 aaPredicted RBP14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 SHISA7A6NL88 538 aa14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 NCAM2O15394 837 aa14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 ZBED1O96006 694 aa14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 RALAP11233 206 aa14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 ATP5C1P36542 298 aaKnown RBP14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 PLA2G4AP47712 749 aa14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 TUBP50607 506 aa14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 KLHL40Q2TBA0 621 aa14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 FKBP15Q5T1M5 1219 aa14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 RSRC2Q7L4I2 434 aaKnown RBP14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 SCD5Q86SK9 330 aa14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 RALGPS2Q86X27 583 aaPredicted RBP14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 DDX42Q86XP3 938 aaKnown RBP eCLIP14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 MIB1Q86YT6 1006 aa14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 PCMTD1Q96MG8 357 aaPredicted RBP14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 NELL2Q99435 816 aa14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 UBXN6Q9BZV1 441 aa14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 ECT2Q9H8V3 914 aa14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 ST7Q9NRC1 585 aa14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 RASAL2Q9UJF2 1139 aa14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 USP3Q9Y6I4 520 aa14.76□□□□□ -0.05
SCAMP4-212ENST00000590266 BECN2A8MW95 431 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 MED7O43513 233 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 GFRA3O60609 400 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 HMBSP08397 361 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 PTMSP20962 102 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 KLK7P49862 253 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 COPB1P53618 953 aaKnown RBP14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 YWHAGP61981 247 aaKnown RBP eCLIP14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 KCNMA1Q12791 1236 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 EFEMP1Q12805 493 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 EML3Q32P44 896 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 RAB41Q5JT25 222 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 PMF1Q6P1K2 205 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 DENND1BQ6P3S1 775 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 ARHGAP18Q8N392 663 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 WBP2Q969T9 261 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 MSANTD3Q96H12 275 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 ZFRQ96KR1 1074 aaKnown RBP14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 MIS12Q9H081 205 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 LMAN1LQ9HAT1 526 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 CYLDQ9NQC7 956 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 RBM12Q9NTZ6 932 aaKnown RBP14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 SPATA6Q9NWH7 488 aaPredicted RBP14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 DNMT3LQ9UJW3 386 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 CNTN6Q9UQ52 1028 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 FHOD1Q9Y613 1164 aa14.75□□□□□ -0.05
SCAMP4-212ENST00000590266 FAM170AA1A519 330 aa14.74□□□□□ -0.05
SCAMP4-212ENST00000590266 NFATC1O95644 943 aa14.74□□□□□ -0.05
SCAMP4-212ENST00000590266 TCF3P15923 654 aa14.74□□□□□ -0.05
SCAMP4-212ENST00000590266 PSEN1P49768 467 aa14.74□□□□□ -0.05
SCAMP4-212ENST00000590266 GOLGA8FQ08AF8 430 aa14.74□□□□□ -0.05
SCAMP4-212ENST00000590266 GOLGA8DPQ0D2H9 430 aa14.74□□□□□ -0.05
SCAMP4-212ENST00000590266 NR1H3Q13133 447 aa14.74□□□□□ -0.05
SCAMP4-212ENST00000590266 ANGPT1Q15389 498 aa14.74□□□□□ -0.05
SCAMP4-212ENST00000590266 PKDCCQ504Y2 493 aa14.74□□□□□ -0.05
SCAMP4-212ENST00000590266 KLHDC7AQ5VTJ3 777 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms