RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 BCCIPQ9P287 314 aaKnown RBP eCLIP12.63□□□□□ -0.39
BRCA1-225ENST00000586385 TBC1D14Q9P2M4 693 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 MSRB2Q9Y3D2 182 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 PCDH15Q96QU1 1955 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 MYOFQ9NZM1 2061 aa12.63□□□□□ -0.39
BRCA1-225ENST00000586385 IGHV1OR15-9A0A0B4J2B8 117 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 FAM92AA1XBS5 289 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 STAU1O95793 577 aaKnown RBP12.62□□□□□ -0.39
BRCA1-225ENST00000586385 CFIP05156 583 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 CD59P13987 128 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 SYT1P21579 422 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 TXLNAP40222 546 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 WASP42768 502 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 CDH8P55286 799 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 SIM1P81133 766 aaPredicted RBP12.62□□□□□ -0.39
BRCA1-225ENST00000586385 GAD2Q05329 585 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 RING1Q06587 406 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 EHHADHQ08426 723 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 EGFLAMQ63HQ2 1017 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 FAM35AQ86V20 835 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 DDX42Q86XP3 938 aaKnown RBP eCLIP12.62□□□□□ -0.39
BRCA1-225ENST00000586385 ZNF513Q8N8E2 541 aaPredicted RBP12.62□□□□□ -0.39
BRCA1-225ENST00000586385 TERB1Q8NA31 727 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 SCFD1Q8WVM8 642 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 CCDC127Q96BQ5 260 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 ERLEC1Q96DZ1 483 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 KIAA1586Q9HCI6 787 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 EHD2Q9NZN4 543 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 GMIPQ9P107 970 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 DMXL2Q8TDJ6 3036 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 PLXND1Q9Y4D7 1925 aa12.62□□□□□ -0.39
BRCA1-225ENST00000586385 FAM221BA6H8Z2 402 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 TBC1D3BA6NDS4 549 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 A8MXQ7 604 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.61□□□□□ -0.39
BRCA1-225ENST00000586385 CLIC2O15247 247 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 EIF3DO15371 548 aaKnown RBP eCLIP12.61□□□□□ -0.39
BRCA1-225ENST00000586385 GJB3O75712 270 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 BEST1O76090 585 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 TBX18O95935 607 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 SERPINF2P08697 491 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 TNNI1P19237 187 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 NDUFV2P19404 249 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 HOXD12P35452 270 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 NASPP49321 788 aaPredicted RBP12.61□□□□□ -0.39
BRCA1-225ENST00000586385 CASP4P49662 377 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 CYP2J2P51589 502 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 SLC5A3P53794 718 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 TNNC1P63316 161 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 RPL6Q02878 288 aaKnown RBP12.61□□□□□ -0.39
BRCA1-225ENST00000586385 DUOXA1Q1HG43 343 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 C10orf76Q5T2E6 689 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 HECTD3Q5T447 861 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 CNNM4Q6P4Q7 775 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 FUKQ8N0W3 1084 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 PGBD3Q8N328 593 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 CHCHD4Q8N4Q1 142 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 KCNV2Q8TDN2 545 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 OVCA2Q8WZ82 227 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 OTUB2Q96DC9 234 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 SMOQ99835 787 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 SLC6A17Q9H1V8 727 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 TNMDQ9H2S6 317 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 SPHK2Q9NRA0 654 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 NXF1Q9UBU9 619 aaKnown RBP12.61□□□□□ -0.39
BRCA1-225ENST00000586385 SLC6A14Q9UN76 642 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 MTMR6Q9Y217 621 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 STARD13Q9Y3M8 1113 aa12.61□□□□□ -0.39
BRCA1-225ENST00000586385 R3HCC1Q9Y3T6 440 aaKnown RBP12.61□□□□□ -0.39
BRCA1-225ENST00000586385 MYO18AQ92614 2054 aaKnown RBP12.6□□□□□ -0.39
BRCA1-225ENST00000586385 PRRT4C9JH25 899 aa12.6□□□□□ -0.39
BRCA1-225ENST00000586385 RTN3O95197 1032 aaPredicted RBP12.6□□□□□ -0.39
BRCA1-225ENST00000586385 VNN1O95497 513 aa12.6□□□□□ -0.39
BRCA1-225ENST00000586385 HOXB2P14652 356 aa12.6□□□□□ -0.39
BRCA1-225ENST00000586385 CASP1P29466 404 aa12.6□□□□□ -0.39
BRCA1-225ENST00000586385 NTSR1P30989 418 aa12.6□□□□□ -0.39
BRCA1-225ENST00000586385 TUBP50607 506 aa12.6□□□□□ -0.39
BRCA1-225ENST00000586385 ZNF33AQ06730 810 aa12.6□□□□□ -0.39
BRCA1-225ENST00000586385 FAM26FQ5R3K3 315 aa12.6□□□□□ -0.39
BRCA1-225ENST00000586385 LRSAM1Q6UWE0 723 aa12.6□□□□□ -0.39
BRCA1-225ENST00000586385 TOGARAM2Q6ZUX3 1019 aa12.6□□□□□ -0.39
BRCA1-225ENST00000586385 RAB44Q7Z6P3 723 aaPredicted RBP12.6□□□□□ -0.39
BRCA1-225ENST00000586385 NELFCDQ8IXH7 590 aa12.6□□□□□ -0.39
BRCA1-225ENST00000586385 MINDY1Q8N5J2 469 aa12.6□□□□□ -0.39
BRCA1-225ENST00000586385 PDZD8Q8NEN9 1154 aa12.6□□□□□ -0.39
BRCA1-225ENST00000586385 CAMK1GQ96NX5 476 aa12.6□□□□□ -0.39
BRCA1-225ENST00000586385 GTPBP2Q9BX10 602 aaKnown RBP12.6□□□□□ -0.39
BRCA1-225ENST00000586385 KLF16Q9BXK1 252 aaPredicted RBP12.6□□□□□ -0.39
BRCA1-225ENST00000586385 SLC32A1Q9H598 525 aa12.6□□□□□ -0.39
BRCA1-225ENST00000586385 VRTNQ9H8Y1 702 aa12.6□□□□□ -0.39
BRCA1-225ENST00000586385 OSER1Q9NX31 292 aa12.6□□□□□ -0.39
BRCA1-225ENST00000586385 DEC1Q9P2X7 70 aa12.6□□□□□ -0.39
BRCA1-225ENST00000586385 HMGXB4Q9UGU5 601 aa12.6□□□□□ -0.39
BRCA1-225ENST00000586385 FASNP49327 2511 aaKnown RBP12.6□□□□□ -0.39
BRCA1-225ENST00000586385 PI4KAP42356 2102 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 ARHGAP33O14559 1287 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 AP5Z1O43299 807 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 CACNG3O60359 315 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 CISD3P0C7P0 127 aa12.59□□□□□ -0.39
BRCA1-225ENST00000586385 IRF1P10914 325 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms