RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 SH3BP1Q9Y3L3 701 aa22.27■■□□□ 1.16
TSEN54-205ENST00000578415 TNRC6BQ9UPQ9 1833 aaKnown RBP22.27■■□□□ 1.15
TSEN54-205ENST00000578415 SPEGQ15772 3267 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 GON4LQ3T8J9 2241 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 MYOFQ9NZM1 2061 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 FAM92AA1XBS5 289 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 TRIM24O15164 1050 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 ZDHHC11BP0C7U3 371 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 GABRG2P18507 467 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 TUBP50607 506 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 CDH8P55286 799 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 BYSLQ13895 437 aaKnown RBP22.26■■□□□ 1.15
TSEN54-205ENST00000578415 KIAA1211LQ6NV74 962 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 TMEM25Q86YD3 366 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 MIB1Q86YT6 1006 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 TERB1Q8NA31 727 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 PLEKHO2Q8TD55 490 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 KCNV2Q8TDN2 545 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 SYAP1Q96A49 352 aaPredicted RBP22.26■■□□□ 1.15
TSEN54-205ENST00000578415 DHX58Q96C10 678 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 VRTNQ9H8Y1 702 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 SPHK2Q9NRA0 654 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 GMIPQ9P107 970 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 DEC1Q9P2X7 70 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 UBE4BO95155 1302 aa22.26■■□□□ 1.15
TSEN54-205ENST00000578415 CACNA1EQ15878 2313 aa22.25■■□□□ 1.15
TSEN54-205ENST00000578415 TMEM8BA6NDV4 472 aa22.25■■□□□ 1.15
TSEN54-205ENST00000578415 HOXD12P35452 270 aa22.25■■□□□ 1.15
TSEN54-205ENST00000578415 DPP6P42658 865 aa22.25■■□□□ 1.15
TSEN54-205ENST00000578415 CASP4P49662 377 aa22.25■■□□□ 1.15
TSEN54-205ENST00000578415 PGFP49763 221 aa22.25■■□□□ 1.15
TSEN54-205ENST00000578415 SNRPFP62306 86 aaKnown RBP22.25■■□□□ 1.15
TSEN54-205ENST00000578415 AMPD3Q01432 767 aa22.25■■□□□ 1.15
TSEN54-205ENST00000578415 SEMA3BQ13214 749 aa22.25■■□□□ 1.15
TSEN54-205ENST00000578415 STK38Q15208 465 aa22.25■■□□□ 1.15
TSEN54-205ENST00000578415 C10orf76Q5T2E6 689 aa22.25■■□□□ 1.15
TSEN54-205ENST00000578415 BTBD8Q5XKL5 378 aa22.25■■□□□ 1.15
TSEN54-205ENST00000578415 C7orf25Q9BPX7 421 aa22.25■■□□□ 1.15
TSEN54-205ENST00000578415 ZSCAN16Q9H4T2 348 aaPredicted RBP22.25■■□□□ 1.15
TSEN54-205ENST00000578415 SLC32A1Q9H598 525 aa22.25■■□□□ 1.15
TSEN54-205ENST00000578415 DMAP1Q9NPF5 467 aaPredicted RBP22.25■■□□□ 1.15
TSEN54-205ENST00000578415 CALCOCO1Q9P1Z2 691 aa22.25■■□□□ 1.15
TSEN54-205ENST00000578415 ZFYVE26Q68DK2 2539 aa22.24■■□□□ 1.15
TSEN54-205ENST00000578415 PLXND1Q9Y4D7 1925 aa22.24■■□□□ 1.15
TSEN54-205ENST00000578415 A0A1W2PQF6 199 aa22.24■■□□□ 1.15
TSEN54-205ENST00000578415 HYAL3O43820 417 aaPredicted RBP22.24■■□□□ 1.15
TSEN54-205ENST00000578415 CFIP05156 583 aa22.24■■□□□ 1.15
TSEN54-205ENST00000578415 RPL6Q02878 288 aaKnown RBP22.24■■□□□ 1.15
TSEN54-205ENST00000578415 ANO4Q32M45 955 aa22.24■■□□□ 1.15
TSEN54-205ENST00000578415 TRMT11Q7Z4G4 463 aaKnown RBP22.24■■□□□ 1.15
TSEN54-205ENST00000578415 FUKQ8N0W3 1084 aa22.24■■□□□ 1.15
TSEN54-205ENST00000578415 DEFB119Q8N690 84 aa22.24■■□□□ 1.15
TSEN54-205ENST00000578415 ELMO3Q96BJ8 720 aa22.24■■□□□ 1.15
TSEN54-205ENST00000578415 MED10Q9BTT4 135 aa22.24■■□□□ 1.15
TSEN54-205ENST00000578415 SDCBP2Q9H190 292 aa22.24■■□□□ 1.15
TSEN54-205ENST00000578415 CD248Q9HCU0 757 aa22.24■■□□□ 1.15
TSEN54-205ENST00000578415 ATP8B3O60423 1300 aa22.24■■□□□ 1.15
TSEN54-205ENST00000578415 AKAP13Q12802 2813 aa22.24■■□□□ 1.15
TSEN54-205ENST00000578415 SPAARA0A1B0GVQ0 90 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 UPK3BL1B0FP48 263 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 UPK3BL2E5RIL1 263 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 SPTLC2O15270 562 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 AP5Z1O43299 807 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 GREM1O60565 184 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 PHACTR2O75167 634 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 IRF1P10914 325 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 HOXB2P14652 356 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 CASP1P29466 404 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 WASP42768 502 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 BMT2Q1RMZ1 405 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 SHC4Q6S5L8 630 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 UNC13DQ70J99 1090 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 C12orf56Q8IXR9 622 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 ZMIZ2Q8NF64 920 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 SMARCD1Q96GM5 515 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 CAPN10Q9HC96 672 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 KRT82Q9NSB4 513 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 SLC6A14Q9UN76 642 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 STARD13Q9Y3M8 1113 aa22.23■■□□□ 1.15
TSEN54-205ENST00000578415 PPP6R2O75170 966 aa22.22■■□□□ 1.15
TSEN54-205ENST00000578415 AP1G2O75843 785 aa22.22■■□□□ 1.15
TSEN54-205ENST00000578415 NTSR1P30989 418 aa22.22■■□□□ 1.15
TSEN54-205ENST00000578415 SIM1P81133 766 aaPredicted RBP22.22■■□□□ 1.15
TSEN54-205ENST00000578415 DUOXA1Q1HG43 343 aa22.22■■□□□ 1.15
TSEN54-205ENST00000578415 ZNF699Q32M78 642 aa22.22■■□□□ 1.15
TSEN54-205ENST00000578415 PREPLQ4J6C6 727 aaPredicted RBP22.22■■□□□ 1.15
TSEN54-205ENST00000578415 EGFLAMQ63HQ2 1017 aa22.22■■□□□ 1.15
TSEN54-205ENST00000578415 SCARA5Q6ZMJ2 495 aa22.22■■□□□ 1.15
TSEN54-205ENST00000578415 IQUBQ8NA54 791 aa22.22■■□□□ 1.15
TSEN54-205ENST00000578415 INTS4Q96HW7 963 aaKnown RBP22.22■■□□□ 1.15
TSEN54-205ENST00000578415 TNIP3Q96KP6 325 aa22.22■■□□□ 1.15
TSEN54-205ENST00000578415 ACOX2Q99424 681 aa22.22■■□□□ 1.15
TSEN54-205ENST00000578415 SMOQ99835 787 aa22.22■■□□□ 1.15
TSEN54-205ENST00000578415 COMMD8Q9NX08 183 aa22.22■■□□□ 1.15
TSEN54-205ENST00000578415 KLK13Q9UKR3 277 aa22.22■■□□□ 1.15
TSEN54-205ENST00000578415 NEUROG3Q9Y4Z2 214 aa22.22■■□□□ 1.15
TSEN54-205ENST00000578415 IGHV1OR15-9A0A0B4J2B8 117 aa22.21■■□□□ 1.15
TSEN54-205ENST00000578415 SRRM3A6NNA2 597 aaPredicted RBP22.21■■□□□ 1.15
TSEN54-205ENST00000578415 STX6O43752 255 aa22.21■■□□□ 1.15
TSEN54-205ENST00000578415 TLR5O60602 858 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms