RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 PM20D1Q6GTS8 502 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 RHOT1Q8IXI2 618 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 SIX6OS1Q8N1H7 587 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 SCML4Q8N228 414 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 SPATA4Q8NEY3 305 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 FBXO22Q8NEZ5 403 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 NT5C3BQ969T7 300 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 TMEM169Q96HH4 297 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 SLC9A7Q96T83 725 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 CLSTN3Q9BQT9 956 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 DDX23Q9BUQ8 820 aaKnown RBP13.74□□□□□ -0.21
CTC1-203ENST00000578240 ASNSD1Q9NWL6 643 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 SPG21Q9NZD8 308 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 PCDHB5Q9Y5E4 795 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 BACE2Q9Y5Z0 518 aa13.74□□□□□ -0.21
CTC1-203ENST00000578240 CTAGE15A4D2H0 777 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 C3orf70A6NLC5 250 aaPredicted RBP13.73□□□□□ -0.21
CTC1-203ENST00000578240 FGGP02679 453 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 CTAGE8P0CG41 777 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 GLUD2P49448 558 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 USP46P62068 366 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 ATP11AP98196 1134 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 CDO1Q16878 200 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 SMTNL2Q2TAL5 461 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 LRRC38Q5VT99 294 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 SYPL2Q5VXT5 272 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 FAM109BQ6ICB4 259 aaPredicted RBP13.73□□□□□ -0.21
CTC1-203ENST00000578240 POLNQ7Z5Q5 900 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 DDX53Q86TM3 631 aaKnown RBP13.73□□□□□ -0.21
CTC1-203ENST00000578240 CTAGE6Q86UF2 777 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 CTAGE4Q8IX94 777 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 DEFB106AQ8N104 65 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 FAM172AQ8WUF8 416 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 UBE2Q2Q8WVN8 375 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 AUTS2Q8WXX7 1259 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 CENPIQ92674 756 aaPredicted RBP13.73□□□□□ -0.21
CTC1-203ENST00000578240 C8orf48Q96LL4 319 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 TBCBQ99426 244 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 ZBP1Q9H171 429 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 EPC1Q9H2F5 836 aa13.73□□□□□ -0.21
CTC1-203ENST00000578240 C2orf16Q68DN1 1984 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 H7C4K7 107 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 C2CD2LO14523 706 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 FBXO21O94952 628 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 ZBED1O96006 694 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 ATF6P18850 670 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 SDC4P31431 198 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 PCK1P35558 622 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 MATKP42679 507 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 ARPP19P56211 112 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 SNX16P57768 344 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 ACAP1Q15027 740 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 ELF2Q15723 593 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 DDR2Q16832 855 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 EFHC1Q5JVL4 640 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 TEX35Q5T0J7 233 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 CCDC181Q5TID7 509 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 VSTM1Q6UX27 236 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 RAPGEF5Q92565 580 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 FAM149B1Q96BN6 582 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 NPY6RQ99463 290 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 RNF14Q9UBS8 474 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 INSL6Q9Y581 213 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 SLC4A7Q9Y6M7 1214 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 PI4K2BG5E9Z4 385 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 LILRB3O75022 631 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 FGF18O76093 207 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 TRUB2O95900 331 aaKnown RBP13.72□□□□□ -0.21
CTC1-203ENST00000578240 LTFP02788 710 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 GLI1P08151 1106 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 HAPLN1P10915 354 aaPredicted RBP13.72□□□□□ -0.21
CTC1-203ENST00000578240 ATP2A2P16615 1042 aaKnown RBP13.72□□□□□ -0.21
CTC1-203ENST00000578240 OR1D2P34982 312 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 PPM1AP35813 382 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 GRIK1P39086 918 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 YWHAZP63104 245 aaKnown RBP13.72□□□□□ -0.21
CTC1-203ENST00000578240 ADCY2Q08462 1091 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 KLF1Q13351 362 aaPredicted RBP13.72□□□□□ -0.21
CTC1-203ENST00000578240 LLGL1Q15334 1064 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 SHHQ15465 462 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 KCNT1Q5JUK3 1230 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 GPR153Q6NV75 609 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 SCN4BQ8IWT1 228 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 VPS52Q8N1B4 723 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 FIBCD1Q8N539 461 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 SPPL2BQ8TCT7 592 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 GPR152Q8TDT2 470 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 GOLGA1Q92805 767 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 SLITRK1Q96PX8 696 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 AP1M1Q9BXS5 423 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 NGRNQ9NPE2 291 aaKnown RBP13.72□□□□□ -0.21
CTC1-203ENST00000578240 IL37Q9NZH6 218 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 NAALADL1Q9UQQ1 740 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 SLC27A5Q9Y2P5 690 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 CHD5Q8TDI0 1954 aa13.72□□□□□ -0.21
CTC1-203ENST00000578240 NYNRINQ9P2P1 1898 aaKnown RBP13.71□□□□□ -0.21
CTC1-203ENST00000578240 FAM92AA1XBS5 289 aa13.71□□□□□ -0.21
CTC1-203ENST00000578240 TRIM66O15016 1216 aa13.71□□□□□ -0.21
CTC1-203ENST00000578240 KRT1P04264 644 aa13.71□□□□□ -0.21
CTC1-203ENST00000578240 CD48P09326 243 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms