RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 SCARA5Q6ZMJ2 495 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 NUDT18Q6ZVK8 323 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 UNC13DQ70J99 1090 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 BBS7Q8IWZ6 715 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 ZNF513Q8N8E2 541 aaPredicted RBP12.52□□□□□ -0.41
CDH8-202ENST00000577228 NAT16Q8N8M0 369 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 KCNV2Q8TDN2 545 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 SMARCD1Q96GM5 515 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 TNIP3Q96KP6 325 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 ZNF396Q96N95 335 aaPredicted RBP12.52□□□□□ -0.41
CDH8-202ENST00000577228 NACA2Q9H009 215 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 GZF1Q9H116 711 aaPredicted RBP12.52□□□□□ -0.41
CDH8-202ENST00000577228 SLC32A1Q9H598 525 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 CCSER2Q9H7U1 834 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 MAGEF1Q9HAY2 307 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 FOXD4L1Q9NU39 408 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 TMEM74BQ9NUR3 256 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 GMIPQ9P107 970 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 CGNQ9P2M7 1197 aaKnown RBP12.52□□□□□ -0.41
CDH8-202ENST00000577228 DEC1Q9P2X7 70 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 RALYQ9UKM9 306 aaKnown RBP12.52□□□□□ -0.41
CDH8-202ENST00000577228 MYOFQ9NZM1 2061 aa12.52□□□□□ -0.41
CDH8-202ENST00000577228 FAM208BQ5VWN6 2430 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 TMEM8BA6NDV4 472 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 AP5Z1O43299 807 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 CUTAO60888 179 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 AP1G2O75843 785 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 CFIP05156 583 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 HOXB2P14652 356 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 ITPKAP23677 461 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 HOXD12P35452 270 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 CASP4P49662 377 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 CDH8P55286 799 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 RPL6Q02878 288 aaKnown RBP12.51□□□□□ -0.41
CDH8-202ENST00000577228 EHHADHQ08426 723 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 BMT2Q1RMZ1 405 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 SNX30Q5VWJ9 437 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 KIAA1211LQ6NV74 962 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 SLC23A3Q6PIS1 610 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 SLC36A4Q6YBV0 504 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 PAQR9Q6ZVX9 377 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 TMEM25Q86YD3 366 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 C12orf56Q8IXR9 622 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 TERB1Q8NA31 727 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 KDF1Q8NAX2 398 aaPredicted RBP12.51□□□□□ -0.41
CDH8-202ENST00000577228 DUSP9Q99956 384 aaKnown RBP12.51□□□□□ -0.41
CDH8-202ENST00000577228 SCNM1Q9BWG6 230 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 TMEM121BQ9BXQ6 578 aaPredicted RBP12.51□□□□□ -0.41
CDH8-202ENST00000577228 VRTNQ9H8Y1 702 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 SLC39A2Q9NP94 309 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 SPHK2Q9NRA0 654 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 KRT82Q9NSB4 513 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 COMMD8Q9NX08 183 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 IL37Q9NZH6 218 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 CALCOCO1Q9P1Z2 691 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 TFIP11Q9UBB9 837 aaKnown RBP12.51□□□□□ -0.41
CDH8-202ENST00000577228 PILRBQ9UKJ0 227 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 ASCC3Q8N3C0 2202 aaKnown RBP12.51□□□□□ -0.41
CDH8-202ENST00000577228 IGF2RP11717 2491 aa12.51□□□□□ -0.41
CDH8-202ENST00000577228 GON4LQ3T8J9 2241 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 CACNA1GO43497 2377 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 ZBTB24O43167 697 aaPredicted RBP12.5□□□□□ -0.41
CDH8-202ENST00000577228 TLR5O60602 858 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 YEATS4O95619 227 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 ZDHHC11BP0C7U3 371 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 GABRG2P18507 467 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 CASP1P29466 404 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 NTSR1P30989 418 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 WASP42768 502 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 AP3M2P53677 418 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 ATXN3P54252 364 aaPredicted RBP12.5□□□□□ -0.41
CDH8-202ENST00000577228 NCOA4Q13772 614 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 KNOP1Q1ED39 458 aaKnown RBP12.5□□□□□ -0.41
CDH8-202ENST00000577228 DUOXA1Q1HG43 343 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 PEAR1Q5VY43 1037 aaPredicted RBP12.5□□□□□ -0.41
CDH8-202ENST00000577228 GRAMD4Q6IC98 578 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 SHC4Q6S5L8 630 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 ACOT1Q86TX2 421 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 FUKQ8N0W3 1084 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 CEP76Q8TAP6 659 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 PLEKHO2Q8TD55 490 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 WBP2Q969T9 261 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 GTPBP2Q9BX10 602 aaKnown RBP12.5□□□□□ -0.41
CDH8-202ENST00000577228 SDCBP2Q9H190 292 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 BLZF1Q9H2G9 400 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 DNAJC17Q9NVM6 304 aaKnown RBP12.5□□□□□ -0.41
CDH8-202ENST00000577228 SLC6A14Q9UN76 642 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 TNRC6BQ9UPQ9 1833 aaKnown RBP12.5□□□□□ -0.41
CDH8-202ENST00000577228 PLXND1Q9Y4D7 1925 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 CFAP47Q6ZTR5 3102 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 ZFHX4Q86UP3 3567 aa12.5□□□□□ -0.41
CDH8-202ENST00000577228 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.49□□□□□ -0.41
CDH8-202ENST00000577228 SPAARA0A1B0GVQ0 90 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 FAM92AA1XBS5 289 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 LRRIQ3A6PVS8 624 aaPredicted RBP12.49□□□□□ -0.41
CDH8-202ENST00000577228 TRIM24O15164 1050 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 POLR2DO15514 142 aaKnown RBP12.49□□□□□ -0.41
CDH8-202ENST00000577228 P4HA1P13674 534 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 CCDC130P13994 396 aa12.49□□□□□ -0.41
CDH8-202ENST00000577228 GFPT1Q06210 699 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms