RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	STIL	Q15468	1287 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	RAB43	Q86YS6	212 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	FLCN	Q8NFG4	579 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	CAPSL	Q8WWF8	208 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	PKD2L1	Q9P0L9	805 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	MET	P08581	1390 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	CBX6	O95503	412 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	MPO	P05164	745 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	RAD23A	P54725	363 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	PTPN21	Q16825	1174 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	USP49	Q70CQ1	688 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	NOP9	Q86U38	636 aa	Known RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	FEZF2	Q8TBJ5	459 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	HGH1	Q9BTY7	390 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	ARMC1	Q9NVT9	282 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	DUOX1	Q9NRD9	1551 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	CIITA	P33076	1130 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	SPR	P35270	261 aa	Predicted RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	CHRNB3	Q05901	458 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	PABPC1L	Q4VXU2	614 aa	Known RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	MLPH	Q9BV36	600 aa	Predicted RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	RMND5A	Q9H871	391 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	VPS9D1	Q9Y2B5	631 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	TGM2	P21980	687 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	POLD2	P49005	469 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	BBS7	Q8IWZ6	715 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	TTC8	Q8TAM2	541 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	LY9	Q9HBG7	655 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	PRL	P01236	227 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	CDK4	P11802	303 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	RPA3	P35244	121 aa	Predicted RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	HNRNPD	Q14103	355 aa	Known RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	GRTP1	Q5TC63	336 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	RIPOR1	Q6ZS17	1223 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	ST14	Q9Y5Y6	855 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	GAK	O14976	1311 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	AKAP10	O43572	662 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	SATL1	Q86VE3	508 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	ARID3B	Q8IVW6	561 aa	Predicted RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	EDC3	Q96F86	508 aa	Known RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	POLI	Q9UNA4	740 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	FSTL1	Q12841	308 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	PRKAA1	Q13131	559 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	CHI3L2	Q15782	390 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	DDB1	Q16531	1140 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	GPR107	Q5VW38	600 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	ARMT1	Q9H993	441 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	CLTC	Q00610	1675 aa	Known RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	SORBS3	O60504	671 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	RXRG	P48443	463 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	CCT8	P50990	548 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	VPS72	Q15906	364 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	MROH9	Q5TGP6	573 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	DSTYK	Q6XUX3	929 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	DHFR2	Q86XF0	187 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	FBXL13	Q8NEE6	735 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	RDM1	Q8NG50	284 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	GINS4	Q9BRT9	223 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	SLC52A2	Q9HAB3	445 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	TRPM5	Q9NZQ8	1165 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	SEPT9	Q9UHD8	586 aa	Predicted RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	ADRA2B	P18089	450 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	ITIH5	Q86UX2	942 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	ACTRT2	Q8TDY3	377 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	USP13	Q92995	863 aa	Predicted RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	TMEM120A	Q9BXJ8	343 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	OR2B2	Q9GZK3	357 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	NUAK2	Q9H093	628 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	KLHL31	Q9H511	634 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	TRMT6	Q9UJA5	497 aa	Known RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	TTC34	A8MYJ7	566 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	TFEB	P19484	476 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	ALDH1B1	P30837	517 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	CTDSPL2	Q05D32	466 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	RFX4	Q33E94	735 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	BNC2	Q6ZN30	1099 aa	Predicted RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	PRCC	Q92733	491 aa	Predicted RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	RAD54B	Q9Y620	910 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	FAM47A	Q5JRC9	791 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	MYDGF	Q969H8	173 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	GIT2	Q14161	759 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	MDH1B	Q5I0G3	518 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	CENPS	Q8N2Z9	138 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	BLOC1S5	Q8TDH9	187 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	TOP1MT	Q969P6	601 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	RNF38	Q9H0F5	515 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	PLLP	Q9Y342	182 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	REXO2	Q9Y3B8	237 aa	Known RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	GPC3	P51654	580 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	BCL7B	Q9BQE9	202 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	MUC13	Q9H3R2	512 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	FAM189A1	O60320	539 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	KRT36	O76013	467 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	CD44	P16070	742 aa	Known RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	EIF2AK2	P19525	551 aa	Known RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	NAMPT	P43490	491 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	MRPS22	P82650	360 aa	Known RBP	4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNF45	Q02386	682 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	STK32C	Q86UX6	486 aa		4.39	□□□□□ -1.71
MACF1-231	ENST00000564288	OR8H2	Q8N162	312 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms